Hyaena hyaena (striped hyena): 120240791
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Entry
120240791 CDS
T07257
Symbol
CPSF6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
hhv
Hyaena hyaena (striped hyena)
Pathway
hhv03015
mRNA surveillance pathway
hhv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hhv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120240791 (CPSF6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120240791 (CPSF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhv03019
]
120240791 (CPSF6)
Messenger RNA biogenesis [BR:
hhv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
120240791 (CPSF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
120240791
NCBI-ProteinID:
XP_039101552
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTV
GDDVGKGAAPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAVHSLGVNDILEIKFFENRAN
GQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQM
SGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPGNLIKHLVK
GTRPLFLETRIPWHMGHSIEEIPIFGLKAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPL
AGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPF
PPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDP
YGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAGDYGS
AIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHSRS
REKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtgtggaccacatagacatttacgcggatgtgggcgaagagttcaaccag
gaagctgaatatggtggacatgatcagatagatttgtatgatgatgtcatctctccatct
gcaaataatggagatgccccagaagaccgtgattacatggatactctcccaccaactgtt
ggtgatgatgtgggtaaaggagcagcaccaaatgttgtctatacgtatactggaaagaga
attgcattgtatatcggaaatctaacatggtggacaacagatgaagacttaactgaagca
gttcattctttgggagtaaatgatattttggagataaaattttttgaaaatcgggcaaat
ggccaatcaaaggggtttgcccttgttggtgttggatccgaagcatcctcaaaaaagtta
atggatctgttgcctaaaagagaacttcatggtcagaatcctgttgtaactccatgcaat
aaacagttcctgagtcaatttgaaatgcagtccaggaaaactacacaatcaggacaaatg
tctggggaaggtaaagctggtcctccaggaggcagttcacgtgcagcatttccacaaggt
ggtagaggacggggccgttttccaggggctgttcccggtggggacagatttcctggacca
gcaggaccaggagggccacccccaccttttccaggaaatttgatcaagcatcttgttaaa
ggaactcggcctttgttcctggaaactaggattccatggcatatggggcacagcatagag
gaaatacccatttttggcctaaaagctggacagactccaccacgtccacccttaggtcct
ccaggcccacctggtccaccaggtcctccacctcctggtcaggttctgcctcctccatta
gctgggcctcctaatcgaggagatcgcccaccaccaccagttctttttcctggacaacct
tttgggcagcctccactgggtccgcttcctcctggccctccacctccagttccaggctac
ggcccccctcctggtccaccacctccacaacagggaccacctccacctccaggccctttt
ccacctcgcccacctggccctcttgggccgccccttacacttgctcctcctccgcatctt
cctggaccacctccaggtgccccaccaccagctccacatgtgaacccagctttctttcct
ccaccgactaacagcggcatgcctacatcagatagccggggtccaccaccgacagatcca
tatggccgacctccaccgtatgataggggtgactatgggcctcctggcagggaaatggat
actgcgagaacgccattgagtgaagctgagtttgaagaaatcatgaatagaaacagggca
atctcaagcagtgctatttcaagagctgtgtctgatgccagtgctggtgattatgggagt
gctattgagacattggtaactgcaatttctttaattaaacaatccaaagtatctgctgat
gatcgttgcaaagttcttattagctctttgcaagattgccttcatggaattgaatccaag
tcttatgggtctggatcaagaagacgtgaacgatcaagagagagggaccatagtagatca
cgagaaaagagtcggcgtcataaatcccgtagtagagatcgtcatgatgattattataga
gagagaagcagagaacgagagagacaccgggaccgggaccgggaccgggaccgagaacgt
gaccgagagcgcgagtatcgtcatcgttag
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