Haemophilus influenzae R2846 (nontypeable): R2846_1466
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Entry
R2846_1466 CDS
T01980
Symbol
rnr
Name
(GenBank) Exoribonuclease R (RNase R)
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
hie
Haemophilus influenzae R2846 (nontypeable)
Pathway
hie03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R2846_1466 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hie03019
]
R2846_1466 (rnr)
03016 Transfer RNA biogenesis [BR:
hie03016
]
R2846_1466 (rnr)
Enzymes [BR:
hie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
R2846_1466 (rnr)
Messenger RNA biogenesis [BR:
hie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
R2846_1466 (rnr)
Transfer RNA biogenesis [BR:
hie03016
]
Prokaryotic type
tRNA degradation factors
R2846_1466 (rnr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
HTH_12
OB_Dis3
RNA_pol_Rbc25
Rpn9_C
Motif
Other DBs
NCBI-ProteinID:
ADO96849
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All DBs
Position
1543777..1546125
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AA seq
782 aa
AA seq
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MTKKRKNLISQDPHYKRELEKYGNPIPSREFILSVIRDNNAPMNRDEILTALSIRNEEQI
EAMRRRLRAMENDGQLVFTKRKRYALPEKLDLFKGTVIGHREGFGFLQVDGKKDDLFIPN
HQMQRVMHGDFVLAQPAGLDRRGRREVRIVRVLESRKKQIVGRFFLENGFSYVVPDDSRI
GRDILVPNEHRNGARMGQVVVVELQERSASFNQPIGVITEILGDNMAKGMEVEIALRNHD
IPHKFPSAVEKYVKKFTEEVPEEAKKGRVDLRNLPLVTIDGEDARDFDDAVYCEKHGKGW
KLWVAIADVSYYVRLRSALDVEAHNRGNSVYFPNRVVPMLPEILSNGLCSLNPQVDRLCM
VCEMQISAKGKLTDYRFYEAVMNSHARLTYTKVAKMLEGDEELRTRYSTLVPHLEELYKL
YQALLGARHQRGAIDFETIETKFIFNAMGRIERIEPVVRNDAHKIIEECMILANIAAANF
MEKHKEPALYRIHATPSEEKLTSFRTFLSEFGLTLEGGLKPTTKDYAALLEKVKERSDHE
LIQTMLLRSLSQAVYHADNIGHFGLALEEYAHFTSPIRRYPDLTLHRGIKYLLAKEQGAK
RKTTDTGGYHYSFDEMDLLGNHCSMTERRADDATREVADWLKCEYMQDHVGGEFSGVISS
MTGFGLFVRLDDLFIDGLVHISTLENDYYQFDAAKQRLIGENSGMQYRLGDKVRIKVEAV
HLENKMVDFSLIGSERKPRRAGKTAKEKAKKVFKELPSKASKKRKSAVKKKEISKKTSRK
RK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaacgtaaaaacttaatcagccaagatcctcattacaaacgagaattggaa
aaatacggcaatccaatcccgagccgtgaatttattttaagcgttattcgagacaataat
gcaccgatgaatcgggatgaaattttgaccgcactttccattcgaaatgaagagcaaata
gaagcgatgcgtcgccgattacgtgcgatggaaaatgatgggcaattagtgttcaccaaa
cgtaaacgctatgccttaccagaaaaattagatttatttaaaggcacggtaattggtcat
cgcgaaggttttggttttttacaggtcgatggcaaaaaggatgatttattcattccgaac
catcaaatgcaaagagtcatgcatggagattttgtcttagcgcaacctgctggattagat
cgtcgtggtcgccgtgaagtgcgaattgtgcgcgtattagaaagccgtaaaaaacaaatt
gtgggtcgctttttcttagaaaacggttttagctatgtggtgcctgatgacagcagaatt
ggcagagatattctcgtgcctaatgaacatcgtaatggtgctcgcatgggacaagttgtg
gttgtcgagttgcaagaacgttctgccagttttaaccagccaattggcgtgatcactgaa
atcctaggcgataatatggcgaaaggaatggaagtggaaatcgccttgcgtaaccacgat
attccccataagtttccaagtgcggtggaaaaatacgtaaaaaaattcactgaagaagtg
cctgaagaagcaaaaaaaggtcgtgtggatttacgcaatttaccgcttgtgactattgat
ggcgaagatgcgagggattttgatgatgccgtttattgtgaaaaacacggcaaaggctgg
aaactttgggtggcgattgcggatgttagttattacgtacgtttacgttccgctttggat
gtagaagcacataatcgtggtaactcagtctattttccgaaccgagttgtaccaatgcta
cctgaaattttatcgaacggcttatgctctcttaacccacaagtggatcgtttgtgtatg
gtgtgtgagatgcaaatttctgccaaaggtaagctcacagattatcgcttttatgaagcg
gtgatgaattctcacgcccgcctcacttataccaaagtagcaaaaatgcttgaaggcgat
gaagaattacgcactcgttattctacgcttgtgcctcatttagaagagctttataaactc
tatcaagcgttgcttggtgcacgtcatcaacgtggtgcgatcgattttgaaaccattgaa
actaagtttattttcaatgcaatggggagaattgagcgtattgaacccgttgttcgcaat
gatgcccacaaaatcattgaggaatgtatgattcttgcgaatatcgcagcagctaatttt
atggaaaaacataaagagcctgcgttatatcgtattcatgccaccccgagcgaagaaaaa
ttaacatcgttccgcactttcttaagtgagtttggtttaactttagaaggtggcttaaaa
ccaaccacaaaagactatgctgctctcttagaaaaagttaaagaacggtctgatcatgaa
cttattcaaacaatgttgctacgttcattaagccaagctgtctatcacgctgataatatt
gggcactttggtttggctttggaagaatatgctcactttacttcgccaattcgccgttat
ccagacttaacacttcatcgaggtatcaaatatttactcgctaaagaacaaggcgcaaaa
cgtaaaactaccgatacaggcggttatcattactcttttgatgaaatggatttacttggc
aatcattgttcaatgacagaacgccgcgccgatgacgccactcgtgaagtggctgattgg
ctgaaatgtgaatatatgcaagatcatgtcggtggcgaatttagcggtgttatttcatct
atgacgggatttggtttatttgtacgcttagatgatttattcatcgatggtttagtccat
atttccaccttagaaaacgattattaccaattcgatgcagcaaaacagcgtttaattggc
gaaaatagcggaatgcaatatcgcttaggcgataaagttcgcatcaaagttgaagcggta
catttagaaaataaaatggtcgatttctcgctaataggtagtgaacgtaagcctcgtcga
gctggaaaaacggcgaaagaaaaagctaagaaagtttttaaagagctaccgtccaaagcc
tccaaaaaacgaaaaagtgcggtaaaaaagaaagaaatttcgaagaaaacatctagaaaa
cgaaaataa
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