Haemophilus influenzae KR494 (serotype f): HifGL_000092
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Entry
HifGL_000092 CDS
T02839
Symbol
rhlB
Name
(GenBank) superfamily II DNA and RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
hik
Haemophilus influenzae KR494 (serotype f)
Pathway
hik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HifGL_000092 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hik03019
]
HifGL_000092 (rhlB)
Enzymes [BR:
hik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HifGL_000092 (rhlB)
Messenger RNA biogenesis [BR:
hik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HifGL_000092 (rhlB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGV10929
LinkDB
All DBs
Position
95756..97003
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AA seq
415 aa
AA seq
DB search
MQQDYLSQQRFSDLPLHPIVRDALAKKGFDFCTPIQALSLPISLNGRDVAGQAQTGTGKT
MAFLTATFHHLLTHQDPNLEYPHPRALILAPTRELAVQISNDAEFLAKACGLKTALAYGG
DGYDKQLQAIERGVDILIGTTGRVIDYVKQGVICLDEIQVVVLDEADRMFDLGFIRDIRY
LLRKCPTPQVRLTMLFSATLSYKVRELAFEDMNDPEYIEIEPEQKTGHRIKEELFYPSNQ
DKMALLLTLMEDEWPERCIVFANTKHRCEEIWGYLAADGHRVGLLTGDVAQKKRLSLLKQ
FTDGNLDILVATDVAARGLHISDVTHVFNYDLPDDREDYVHRIGRTGRAGESGVSISFAC
EEYAMNLPAIEEYIGHSIPVSQYETEALLELPKPYRLKRAVRPQGHTRHLSYHTK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagattatttaagccaacaacgattctccgatcttcctctacatccgattgta
cgagatgctttggcaaaaaaaggctttgatttttgtaccccaattcaggctttatccttg
cctatcagtttaaatggacgcgatgtcgcaggacaagctcaaactggtacaggcaagaca
atggcttttttaacggctacttttcaccatcttttaactcaccaagatcctaatctggaa
tatcctcacccaagagctttgattttagcacctactcgagaattagcggtgcagattagt
aatgacgcagaatttcttgcaaaagcctgtggattaaaaaccgcacttgcctatggtggc
gatggttatgataaacaactacaagcgattgagcgtggcgtagatattttgattggtacg
acggggcgagtcattgattatgtgaaacaaggcgtaatttgtttagatgaaattcaagtt
gtcgtgctagatgaagcggatcgaatgttcgatcttggatttatccgtgatattcgttat
ttattgcgtaaatgccccactccgcaagtgcgtttaacgatgttattttcagcgacgctt
tcttataaagtgcgtgaattagcatttgaagatatgaatgatcctgaatatattgaaata
gaaccagaacaaaagacaggacatcgcattaaagaagaacttttttatccatctaatcag
gataaaatggcacttctcttaaccttaatggaagatgaatggcctgagcgttgtattgta
tttgctaatacgaaacatcgttgtgaagaaatttggggttatttggctgctgatgggcat
cgtgtcggcttactgactggcgatgtagcacagaaaaaacgtttgtccttattaaaacaa
tttactgatggtaatttagatattttagtagcaacagatgtggctgctcgtggcttgcat
atttctgatgtgacgcatgttttcaattatgatttacccgatgatcgagaagattatgtt
caccgaattggccgtactggacgagcaggggaaagtggtgtttctattagtttcgcttgc
gaagaatatgcgatgaatttaccagcaattgaagaatatattggccattctatcccagtg
agccaatatgaaacagaagccttgcttgaactgccgaaaccatatcgtttaaaacgtgcg
gtgcgaccgcaagggcatacaagacatctttcttatcacacaaaatag
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