Haemophilus influenzae F3047 (nontypeable): HICON_16930
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Entry
HICON_16930 CDS
T01400
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
hil
Haemophilus influenzae F3047 (nontypeable)
Pathway
hil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HICON_16930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hil03400
]
HICON_16930
Enzymes [BR:
hil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
HICON_16930
DNA repair and recombination proteins [BR:
hil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HICON_16930
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HICON_16930
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HICON_16930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CBY87157
LinkDB
All DBs
Position
complement(1545173..1546594)
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AA seq
473 aa
AA seq
DB search
MAKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGEPIMFYCKQTNDYLPAPEAV
MVTGITPQECNEKGLSEPEFAANILAEFSQPNTCVMGYNNIRYDDEMTRYTFYRNFIDPY
EYSWKNGNSRWDLLDLVRACYALRPEGINWAYDDDGMPSFRLEKLTKANGIEHENAHDAM
ADVYATIAMAKLIKEKQPKLFQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCT
WVAPLAWHPTNQNALIVCDLTGDIDNLLAKSADELRTDLYTKKSKLEERGVSSVPLKLVH
INKCPILAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFNEERQFASNDN
VETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKRILELLFHYRARHFYKTLTRA
EQIKWKKYRQNKLEKSAVEFESSLQRLAEEHSDNSEKLSLLQQVYEYGIKLLG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatttcagcttttttatttacgattatgaaagttttggtgtaaatccagca
acagatcgtcctgcgcaatttgcgggtattcgtacagatgctgattttaatatcattggc
gaaccaataatgttttattgtaaacaaaccaacgattatttaccagctcctgaagccgta
atggtcacaggaattacgcctcaagaatgtaatgaaaaggggctttcagagcctgaattc
gccgcaaatatcttagcagaattttcccaacccaatacttgtgtcatgggttataacaat
attcgctatgatgatgaaatgacgcgttatacgttttatcgtaattttattgatccttat
gaatacagctggaaaaatgggaattcacgctgggatttgttagatttagtgcgagcctgt
tatgccttgcgtccagaaggaattaattgggcttatgacgatgatggaatgccaagtttc
cgcttagaaaaactcactaaagcaaatggtattgagcatgaaaatgctcacgatgccatg
gcggatgtatatgcaactattgctatggcgaaattaattaaagaaaaacagcctaaatta
ttccaatatttctttgaaaatcgcggtaaaaaagaaatcgaaaaattagttgatacaggc
gcaatgacacctttagtgcatgtttctggaatgctagggaattatcgtggaaattgcact
tgggttgcacctttagcttggcatccgacaaatcaaaatgcactcattgtttgtgattta
actggcgatatcgataatttattagccaaaagtgcggatgaattacggacagatttatat
accaaaaaatctaaattagaagaaagaggagtttcatctgttccgttaaagcttgtgcat
atcaataaatgtcctattttagcaccagctaaaactttgttaccagaaacagcaaatcga
ttgggtattgatcgacaattatgcttggataatcttgcaaaattacgagcatcttttgat
attcgtgaaaaagtggcggatatttttaatgaagaacgtcaatttgcatcgaatgataat
gtagaaactgagttatacaatggcttttttagcaatgctgataaaaataatatggctatt
ttacgtagtttacctgcagaaaaattatctgaacatggtttagcttttgaagataaacgt
atccttgaattattattccattatcgcgctcgtcatttttataaaaccctcacacgcgct
gaacaaattaaatggaaaaaataccgacagaataaacttgaaaaaagtgcggtagagttt
gaatcaagtttacaacgtttagctgaggaacattcagataattctgaaaaactatctttg
ctacaacaagtatatgaatatggtataaaattactaggttag
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