Heterobasidion irregulare: HETIRDRAFT_155388
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Entry
HETIRDRAFT_155388 CDS
T03455
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
hir
Heterobasidion irregulare
Pathway
hir03082
ATP-dependent chromatin remodeling
hir03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
HETIRDRAFT_155388
03083 Polycomb repressive complex
HETIRDRAFT_155388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hir03036
]
HETIRDRAFT_155388
Enzymes [BR:
hir01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
HETIRDRAFT_155388
Chromosome and associated proteins [BR:
hir03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
HETIRDRAFT_155388
HDAC complexes
Sin3A-HDAC complex
HETIRDRAFT_155388
BRAF-HDAC complex
HETIRDRAFT_155388
REST complex
HETIRDRAFT_155388
SHIP complex
HETIRDRAFT_155388
MiDAC complex
HETIRDRAFT_155388
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
HETIRDRAFT_155388
Heterochromatin formation proteins
Other heterochromatin formation proteins
HETIRDRAFT_155388
Chromatin remodeling factors
NuRD complex
HETIRDRAFT_155388
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
20667568
NCBI-ProteinID:
XP_009543890
JGI:
Hetan2_155388
UniProt:
W4KEB4
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MSRRRVSYYYDPDIGSYSYGQGHPMKPLRMRITHELVTVYDMLPKMEVLRARRATPEAMA
AFHTDEYVHFLNKVTPDTAEELTYHGTRFLVGDDNPAFEGIFEFCSISAGGTIAAAKRIT
SGAADIAINWAGGLHHAKKREASGFCYINDIVLGILELLRTFPRVLYVDIDCHHGDGVEE
AFYTTDRVMTCSFHKFGEYFPGTGTQEDKGRGKGKGYAVNVPLKDGLTDDSFRSIFEPVV
SGIVDTFRPAAIVLQCGSDSLSGDKLGCFNVTMKGHAHCVQFIRNLNIPMILLGGGGYTV
KNASRTWAYETACALGIEKDINLSLPWNEFFEWFGPRYRLEVAESNMEDLNIKDGSLEKV
KEIALKQLHELQPVPSVAMHDVPRESVGQHLGLFRDGQLGSRDELDDRLAQHSRFVYNLQ
EPETVDSLTDDSDDVDSYRYDSDEVLSSQRQRPLRAGQRKRMSIVSNEWYTVPTLDHFGY
YEQNSERRKRRFFDSGLRWDSDARLAVMNYNPRYNLREAMEAEQPWSVPAAPDELVEFEE
EMEEEED
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacgacgcgtttcctactattatgatccggacatcggatcatactcgtatggt
caaggccatccaatgaaaccgcttcgcatgcgaatcacccatgaattggtaactgtgtat
gatatgttaccgaagatggaagttctaagagcacgtcgcgcaactcctgaagccatggct
gcgtttcacacagacgaatatgtacatttcttgaataaagtaactcccgatacggcagaa
gaattgacgtaccacgggacaaggttcttggtcggggacgataatccagcattcgaaggc
atcttcgagttctgctcgatctcagctggtggtaccatagctgccgcaaaacgcatcacc
tctggggcggccgacatcgccatcaactgggctggagggctacatcacgccaaaaagcgt
gaagcctctgggttctgttacatcaatgacatagtactcggcatcctcgaactcctacgc
accttcccacgcgtgctttatgtcgacattgactgccatcatggcgatggcgtggaggag
gcgttttatacgactgatcgcgtcatgacgtgcagctttcacaagtttggtgaatacttt
cctggcacaggtacacaagaagacaaggggaggggcaagggcaaggggtatgcggtgaac
gttccgttgaaggatgggttgacagacgactcattccggagcatattcgaaccggtcgtg
tcaggaattgttgacacctttaggcccgctgctatagttcttcaatgtgggtcggactcg
ctgtcgggcgacaagctcggctgtttcaacgtgaccatgaagggccatgctcactgtgtc
cagttcattcgtaacttgaatattcccatgatacttcttggcggcggcggctatacagtc
aagaatgcgtcacgtacatgggcgtacgagaccgcatgcgctctaggaattgaaaaagat
atcaatctgagcctgccgtggaatgagttcttcgagtggtttgggccaaggtataggcta
gaagttgcggagagtaatatggaggatctaaatatcaaggacggctcgttggaaaaagtg
aaggaaattgccctgaagcaattacacgagttgcaaccggtcccttctgtcgctatgcac
gacgttcctagagagagcgtgggccagcatcttggattattcagagacggtcaactaggc
tcaagagacgagcttgatgatcgcttagcacagcattcccggtttgtgtacaacctacag
gaaccagaaacagtcgactctcttactgacgactcggatgatgttgactcgtaccggtac
gactccgacgaagttttgtcttcgcaaagacagcgaccacttcgcgcaggacagcgaaaa
cggatgagtattgtatctaacgagtggtacacagtccctacgctagatcacttcggctac
tacgaacagaattcggagagaagaaagcgacggttcttcgacagcggcttaagatgggac
tcggacgcaaggctcgctgtcatgaattacaacccaagatacaatctgagagaggcaatg
gaggcggaacagccgtggtctgtgcctgctgcaccagatgaattggtggaatttgaagag
gagatggaggaagaggaagattga
DBGET
integrated database retrieval system