Heterobasidion irregulare: HETIRDRAFT_181101
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Entry
HETIRDRAFT_181101 CDS
T03455
Symbol
sodc
Name
(RefSeq) Cu2+/Zn2+ superoxide dismutase
KO
K04565
superoxide dismutase, Cu-Zn family [EC:
1.15.1.1
]
Organism
hir
Heterobasidion irregulare
Pathway
hir04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
hir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HETIRDRAFT_181101 (sodc)
Enzymes [BR:
hir01000
]
1. Oxidoreductases
1.15 Acting on superoxide as acceptor
1.15.1 Acting on superoxide as acceptor (only sub-subclass identified to date)
1.15.1.1 superoxide dismutase
HETIRDRAFT_181101 (sodc)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sod_Cu
CHRD
Motif
Other DBs
NCBI-GeneID:
20668570
NCBI-ProteinID:
XP_009546315
JGI:
Hetan2_181101
UniProt:
W4K7C2
LinkDB
All DBs
Position
Unknown
AA seq
214 aa
AA seq
DB search
METYRAALVNSKGNRTVIFVGLVTAAIMLVLWGLLEPASPPTIRKAVVVLSGPESKAFGT
VAFEQVSSTGAVTVTGDLQNLDPSARRGFHIHQLGDTTNGCLSAGPHFNPYNKNHGAPSD
SERHVGDLGNIESDRFGIAKFTIQDSMITLNGPLSIVGRTVVLHTGVDDLGKGNNAESRK
TGNAGARSACGIIGTIYFFYLLHFLCSNSPDRDC
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggagacgtaccgcgctgcgcttgtcaatagcaaggggaataggactgtcatatttgtc
ggcctggttaccgctgctattatgctcgttttatggggattgcttgagccggctagtcca
ccaacgattcgcaaggcagttgtcgtgctctctggaccagaatcgaaggcttttggcaca
gtggccttcgaacaagtttccagtaccggggcggttactgtgactggagacctccaaaac
ctcgatccttcagccagacgcggtttccacatacaccaactaggcgatacaactaatggt
tgcttgtcggctggcccccatttcaacccatataataagaaccatggcgccccttctgac
tcagagagacacgtaggcgatctcggaaacatcgaaagcgacaggtttggtattgccaag
ttcacgatccaggatagcatgattactttgaacggacctttaagcattgttggtcgcact
gtggtcttacatacgggcgttgatgaccttggaaaaggtaataacgccgagtctcgaaag
acaggaaacgccggcgcacgatcagcgtgtggcatcattggtacaatatatttcttttat
ctactccatttcttgtgctcaaattctccggatagggattgctga
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