KEGG   Heterobasidion irregulare: HETIRDRAFT_377982
Entry
HETIRDRAFT_377982 CDS       T03455                                 
Name
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hir  Heterobasidion irregulare
Pathway
hir03030  DNA replication
hir03410  Base excision repair
hir03420  Nucleotide excision repair
hir03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HETIRDRAFT_377982
   03410 Base excision repair
    HETIRDRAFT_377982
   03420 Nucleotide excision repair
    HETIRDRAFT_377982
   03430 Mismatch repair
    HETIRDRAFT_377982
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hir03032]
    HETIRDRAFT_377982
   03400 DNA repair and recombination proteins [BR:hir03400]
    HETIRDRAFT_377982
Enzymes [BR:hir01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     HETIRDRAFT_377982
    6.5.1.6  DNA ligase (ATP or NAD+)
     HETIRDRAFT_377982
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     HETIRDRAFT_377982
DNA replication proteins [BR:hir03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HETIRDRAFT_377982
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     HETIRDRAFT_377982
DNA repair and recombination proteins [BR:hir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HETIRDRAFT_377982
   NER (nucleotide excision repair)
    Other NER factors
     HETIRDRAFT_377982
   MMR (mismatch excision repair)
    Other MMR factors
     HETIRDRAFT_377982
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 20671909
NCBI-ProteinID: XP_009541118
JGI: Hetan2_377982
UniProt: W4KMZ6
LinkDB
Position
Unknown
AA seq 830 aa
MGRQQTLGKFFAMPLNKKAPPQQANLRELWGGKKATVTQENVEVKTEDVSASSASEKVET
GENDMQIDESNVPSDRPKSKKRRVVSSDEEDEGDAPAEGPKLKSKAVVHDDDKGASKVPT
SKESSSRKPKKRKTAPAKVVEHEEGEAEAASSHSADEGAKEDSDGEEELEEEEEERKVAA
EVALDRRGEVDVEGGWKVGDPVPYAALAKTFALIEATTKRLEKTSLLTSLLLLVIQRSKE
GDTDSLLRTVYLCINRLSPDYIGIELGIGESILVKAIGESTGRSLPAIKAELKKEGDLGL
VAMTSKNMQKTLFKPKPLSVPFVFSHLKEIALSAGHSSQNKKVSIITKILAACQGQEAKY
IVRSLEGKLRIGNAERTVLVAIAHASVLAEQERSGKKWKQEKLTARLEEGASVVKSVYSE
LPTYDKVIPALLNVGIDGLREQCKLTPGVPLKPMLAKPTKAIGEVLDRFEGKRFTCEYKY
DGERAQVHMLEDGKVSVFSRNSEDMSKKYPDLVEQLPHCIKESTKSFVLDAEAVAIDRTT
GKLMPFQELSKRKRKDVKVEDIQVRVCLFGFDLLYLNGEPLLHKTLLERRELLKEHFQPV
EGEFAFAKSTDNESTEDIQAFLDVSVKDGCEGLMVKMLESEASYYEPSRRSVNWLKLKKD
YLAGLGDSLDLAVVGGYYGKGKRTNVYGAFLLACYDADGEIFQTICKIGTGFSEEVLASH
YAVLKPLELTKARGDVKAGGAKPDVWFEPKVVWEVLTADLSLSPVYTAAMGLVDDRGISL
RFPRFIRVRDDKNVDDATGPEQIAEMYERQVLAQGSSKKKGGGDVDDGFW
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgggtcgccagcaaactctcggcaaattctttgccatgccgctgaacaagaaggcgccg
ccacagcaggcgaacctcagggagctgtggggcggcaagaaggccaccgtcacgcaagag
aatgtcgaggtcaagactgaagacgtgagcgcgtcgagcgcgtcggagaaggtggagacg
ggagaaaatgatatgcaaatcgatgaatcgaacgtgccatctgaccgcccgaaaagtaag
aaacgcagagtggtgtcatcagacgaggaggatgaaggcgacgcgcccgccgaaggtcca
aagctcaaatccaaggctgtggttcatgatgacgacaagggagcatccaaagttccaacc
tctaaggaatcgtcttccagaaagcctaagaaacgcaagactgcccctgccaaagtggtc
gaacacgaggagggcgaagcggaggcagcgtcttcgcattctgcagatgaaggagccaag
gaagattctgatggtgaagaagagttggaggaggaggaggaggaaagaaaggtcgccgct
gaggtagcgctggatagaagaggtgaagttgatgtagagggtggatggaaagtcggcgat
cctgttccatatgcggctctggcaaagacgtttgctctcatcgaagcaacgaccaagcga
ttagagaagacgtctctcctgaccagtttgctgctgcttgtcattcaacggagcaaggaa
ggagacaccgactccctgttgcggacagtgtatctctgtatcaaccgactcagcccagat
tatattggtatcgagctcggaatcggcgagagcatcttggtcaaggctatcggggagtca
acaggacggagtcttcctgccatcaaggccgagctcaagaaagaaggagatctcggcctt
gtcgcaatgacctcgaaaaacatgcagaaaactttattcaagcctaagcccctcagtgtg
cctttcgtcttctctcatttgaaggaaatagccctgagtgctggccattcgtctcaaaac
aagaaagtctccatcatcacaaagatactagcagcatgtcaagggcaggaggccaagtac
atcgtccgcagtttggaaggcaagctccgaattggtaacgcagaacggactgtgctcgtg
gcaatcgcacatgcctctgtattggcagaacaggaaagatccggtaagaaatggaagcag
gagaaattgaccgctcgtctggaggagggcgcaagcgtcgtgaaatctgtctacagcgag
cttcctacatacgacaaagtcatacctgcgcttctcaacgttggaatcgatgggcttcgc
gagcaatgtaagctcaccccaggcgtcccgctcaaaccgatgctcgcgaagccgacgaag
gcgatcggcgaggttctcgatcgtttcgagggcaagcggttcacgtgtgagtacaagtat
gatggcgagcgtgcgcaggtgcacatgctcgaggacggcaaagttagcgtgttcagcagg
aactcggaagatatgagcaaaaagtacccggatctcgtcgagcagctgccgcattgcatc
aaggaatcgacgaaatcgttcgtcttggatgcggaagctgtcgcgatcgaccgaacaacg
ggtaagcttatgcctttccaggaactgagcaaacggaagcgtaaggacgtcaaggtggaa
gatattcaagtccgagtgtgcctttttggatttgacctgctctacctgaacggcgagccg
ctgctgcataagactcttctcgagcgacgcgagctgctgaaagagcacttccagcctgtt
gagggagagtttgcgttcgccaagtcgacggacaacgagtccacagaggacatccaagcg
ttcttggacgtcagcgtgaaagacggatgcgagggactcatggtcaagatgctcgagagc
gaggccagctactacgagcctagtcgtcgtagcgtgaattggctcaagctgaagaaagac
tacctcgcggggctcggcgactcgctcgacctagctgtcgtcgggggctactacggaaag
ggcaagcgcacaaacgtctacggcgcgttcttgctcgcctgctacgatgccgacggcgag
atattccagacgatctgcaagatcggcacggggttcagcgaggaggtgctcgcgtcgcat
tacgccgtgctcaagccgctcgagctcaccaaggcccgcggggacgtcaaggcgggcggc
gcaaagccggacgtgtggttcgagcccaaggtagtgtgggaggtgcttacagcggatctg
agtttgagccccgtgtatacggcagcgatgggattggtggatgatcggggtatctcgctg
cggttccctcggtttattcgtgttcgtgatgacaaaaatgtggatgacgcgacgggaccc
gagcagatcgcagaaatgtacgaacgacaggtgctcgcgcaggggagcagcaagaagaag
ggcggaggcgatgtggatgacgggttctggtaa

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