Hermetia illucens (black soldier fly): 119660285
Help
Entry
119660285 CDS
T08287
Name
(RefSeq) collagen alpha-1(I) chain-like
Organism
his
Hermetia illucens (black soldier fly)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
119660285
NCBI-ProteinID:
XP_037924684
EnsemblRapid:
LOC119660285
LinkDB
All DBs
Position
6:complement(88469245..88474799)
Genome browser
AA seq
1750 aa
AA seq
DB search
MKYQTILLLLYGLLLTTLAEEEKPNTTQINVQASSEKVNVSRNPRFFIRPLRRLCVCPPG
PPGPPGKPGNRGPPGVDGSPGVKGRRGSEGEPGNRGTPGSPGRNGKPGDPGGKGLPGFDG
EPGPVGPPGRPGQDGIAGPRGPVGKTGPTGLTGPMGPVGLPGEKGLAGRPGHRGRPGREG
LRGLSVIYVDRWSGYPYQPASQGNIWNPSSIPHSGHHHRPSHSHRPSSNKKPKPHQKPGH
HHHKPGSHKPGHGKPGHGKPGHGQPAHGQTGLGQLVPGQTGPGQTGPGQTGPGQTGPGQT
GPGQSGPGQTGPGQTATGQTGPGQTGPGQTGLGQTGPGQTGPGQTGAGQTGPGQTGPGQT
GPGQTGPGHPAHGQPGHGQPGHHQPGHNQPGHHQTGNHGPGHHHPGHHHPQHHRPSHHRP
SHHRPSHHKPSHHIPSHNIPSQAGLISTPSGPSTPPGPGGPSTATGPLAPSTPPGTAPQV
GPSGPTTPTGPSIPSAPLAPSGPSTPSAASAPSMPSAPFVPTSPSAPSGPPPSAGLTSPS
GPLGPSTPSAVPSAPLAPSVSSAPAAPSTGNAPATGNAPATGNAPTTANAPNAGTVPTAG
AAPITGNAPSTPAAAAGGAAPATGNAPSVSTAPTAGTAPATGNAPLAPATATAGAAPATG
NAPSTPTAGAAPATGNAPSAPTTGAAPAAGNAPTATAGAAPATGNAPSVPTAPNAGAAPA
TGNVPSVPTGPTSPSAPAMSGPSVPLVPGNVPTGPSGPNLITEPGAAAPSAPAATPSEPF
LTAPSTAAAPSTASAPPIPAHPSAPGAATAAVAPVTGLAPSNPASPAPAVAPPNPALTTG
PSGPTTLTSPSGPAVGAAPSAPNGPPAPAVGSPSPNNPLEISGAQAPSAIELTSPSVPAA
PMAPSVAGIPGTSPSGQTGISIPDIQGAVLPGIIFKPSRPTPPAPNQPSQPQTGVTTPSG
NGPTTGGSLPSTGQLPSVAQAPNYPHYPPGGSHHPGGQGQGTQIPHFPSNGQPPAFPSIP
GQGSNIPNYPGYPIGGQLAPQYPSGPTYPYRPGGGQGPTNAIQTPSRPPHRPSQLIPQHP
NVNPGLLTSPSLPVDVTGPAVPDVTDVGHPNAPNAGSPISHPPHRPGVPPNIPLEISGGL
LPSEISLPSPPQNQPGVPTILNKPGNQPGVGANPLSPAGGGNPINGISFKPPNSGNQPTE
KPINPVQGGANNPPQTTPSEPAGLSTPSGPEEFLKPTDVSQPEFGPLENQLPPERPTMLR
PEPTGQTSPSEPSSPSSPSEISGVSSPSEISSPSEPSTPTADGDPGNVPTQEAMKPYPTD
ATIPATYRPTKPNRPNRPQRPPSGGKPPNSESVESVELNITSSLSPGIVTKPDNNPAAMA
PGEQITGPPPTAAKPSPTPEANTQEPNPDLTSELEIFSPDPSPPGPPSFGPSIEPTEPTE
TTVNLSVTDQVSPSVLDPVDPTEPGPTEPGVLEPTTPDVMKPDNPESTNSQNKPEQTAPD
NPQSGPQSPGEPTNPDSNKEETAVNPTPGSFITPSGELTPSLVFEPTNPSDPSNPDIPTP
LELEHGIQPIYPEEWAALIHDTGGKPPRRIPFHNPNHFNQANNNQNVNDEDTDQSSEYED
TEQSSEYVENDYVDDADPDDDQETDENDDEKDDDDGGYESNSIAEGTNDKGRRRGSIARS
YEEDDYEESYRDGSIEKNVQVWDESRDNDGRSYEDDYVDDNEDQYSKFYEEEYYRFRRKK
SLKNTTETAR
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatcaaacgatactcctccttctatatggtttgctactaacaacacttgctgaa
gaggaaaaaccaaatacaacgcaaataaatgtgcaagcttcaagtgaaaaagtgaatgtg
agtcgaaatcctcggttctttatccgtcctttaaggcgcctgtgtgtttgtcctcctggc
ccaccgggaccaccagggaaaccgggaaatcgaggaccaccaggagttgatggatcacct
ggagtgaagggacgacgaggatctgaaggtgaacccggtaatagaggaacgcccggttca
ccaggaaggaatggcaaaccaggagatccgggaggcaagggacttcctggattcgacggt
gaacctggacctgtaggtccaccaggccgacctggacaagatggtatcgctggtcccaga
ggaccagttggcaaaacaggtccaactgggcttacggggccaatggggccagtgggttta
ccaggcgaaaaaggattagctggaaggcctggtcatagaggtagaccaggccgtgaaggt
cttcgtggtttgtcagtgatctacgttgatcgttggagtgggtatccgtatcagccggca
tcacaagggaacatttggaatccctcttcaatccctcattctggtcaccatcacagacct
agtcacagtcacagacctagcagcaataaaaaaccgaaacctcatcagaagccgggacat
catcatcataaaccgggttctcataaacccggtcatggaaaacctgggcacggaaaacct
ggacatggacaacctgctcatggtcaaactgggcttggacaacttgttcctgggcaaact
ggacctgggcaaactggacctggacaaactggccctggacaaactggccctgggcaaact
ggacctggacaatctggacctgggcaaactggacctggacaaactgccactggacaaact
ggacctggacaaactggacccggccaaactggacttggtcaaactggacctggtcaaact
ggaccaggacaaactggagctggacaaactggacctggacaaactggacctggacaaact
ggacctggacaaactggacctggacaccctgcccatgggcaacctgggcatgggcagccc
ggacatcaccaaccaggacacaatcagccaggacaccaccaaactggaaatcatggaccc
ggacatcaccatccaggtcatcatcacccgcaacatcatagaccatcgcatcatagacct
tcgcatcatagaccttcccatcataaaccttcacatcatataccatcgcacaatatacct
tcacaagcaggactcatatcaaccccatcgggaccatctacaccaccaggacctgggggt
ccatctactgcaactgggccattagcaccgtccactcctcctggaacagctccacaggtt
ggaccttctggacccacgactccgacaggtccctcaattccatcagcacctttagctcca
tctggtccttcaactccatcagccgcttcagctccgtccatgccttcagcaccatttgta
ccaacgagcccatcggcaccttctggacctccgccatcagctgggctaacaagtccttcc
ggcccattaggtccttcaacgccttcggcagtcccatcagcacctttagctccatccgtt
tcttcagcaccagctgcacctagtaccggcaatgcaccagctacaggaaatgcgcccgcc
acaggaaatgcgccaacaacagcaaatgctccaaatgcaggaacggtaccaacagcaggt
gccgcgccaattactggaaatgcaccttctactccagccgcggcggcaggaggcgcggca
ccagctacaggaaatgcaccttccgtttcaactgcaccgactgcaggaaccgcaccggct
acaggaaatgctcctttggctccagccactgcaacggcaggagcggctccggctacagga
aacgcaccatctactccaactgcaggagcggcaccggctacaggaaacgcaccatctgct
ccaactacaggagcggcaccggctgcaggaaatgcgccgactgcaacggcgggagcggca
ccggctacaggaaatgcgccatctgtgccaaccgcgccaaatgcaggtgcggctccggct
acaggaaatgtaccatctgttccaaccggcccaacttcacctagtgcgcctgctatgtca
ggaccgtcagttcctcttgtccccggaaatgtacccactggaccctctggaccgaatctc
ataacagagcctggtgccgcagcaccatctgctcctgcagcaactccctctgaacctttt
ctaacggctccatcgacagcggctgctccttcaacagcatctgcgcctcccatccctgcc
catccatctgcaccaggggcagctacagcagcagttgcaccggtaactggactagcccca
tcaaatcctgcgtcccctgctccagcagtcgctcctcctaacccagctttaacaaccggt
ccatctggcccgacaactttaacgagtccttcaggaccagcggttggagcagcaccgtct
gcaccaaatggacctccagcaccagcagtaggtagtccttctccaaacaatccgttggaa
attagtggagcgcaagcaccaagcgctattgaattgacatcaccatctgttccagctgcc
ccgatggcacctagtgttgcaggaatacctggaacctcgccttctgggcaaacaggcata
agtatacctgatattcaaggagctgtattaccaggtattattttcaaacccagccggcca
actccacctgctcccaatcaaccaagccaaccccaaacaggagttacgaccccgagtgga
aatggacctaccactggtgggtcattgccaagtacaggtcaattgccaagtgtagcgcaa
gcgccaaattatccacattatcctcctggcggatcgcaccaccctggaggacaagggcag
ggaacacaaataccccattttccgtcgaatggacaacctccagcttttccctcaattcca
gggcaaggatcaaatattcctaattatcccggatatcctataggcgggcagctagcaccg
caatatccgtctgggccaacctacccatatcgacctggcggaggacaaggacctactaac
gcaattcaaacgccatcaagacctccccatagaccaagtcaattgataccacaacaccca
aatgtgaatccaggattgctcacttcaccttctcttccggtcgacgtaactggtccagct
gttcctgatgtaaccgatgtgggacacccgaatgcaccaaatgcaggatcacctatatca
catcctccccatagaccaggagttccgccaaatataccgctggaaataagtggtggttta
ctaccttctgaaataagtctcccctctccgccgcaaaatcaacctggtgttcctacaatt
ttaaacaaacctggaaatcaacctggtgtaggggcaaacccactgtcaccggctggcggt
ggtaaccctatcaacggaatatcttttaaaccgcctaattcagggaatcaaccaacagaa
aagccaataaacccggttcagggtggtgccaacaatcctcctcaaacaacaccaagtgaa
cctgctgggctttctactcccagcggacctgaagagtttttgaaaccaacggatgtaagt
cagccagaatttggacctcttgaaaaccaacttcctccagagagaccaactatgttacga
cctgaaccaactggacaaacttccccttcagaacctagctctccttcttctcctagtgaa
atttctggagtgtcatcgccttctgaaatatctagcccgagcgagccatctacaccaact
gcagatggagatccgggaaacgtacctactcaggaagcaatgaagccataccctacagat
gcaacgataccagctacttatagaccaacgaaacctaatcgaccaaatcgacctcagcgt
cctccctctggcggaaaacctccaaattcagaatcagtggaatctgtggagttgaacata
acatcaagtttatctccgggaatcgttacaaaacctgataataaccctgctgccatggcg
cctggtgaacaaattacaggcccaccaccaactgcagcaaaaccttctccaactccggaa
gcaaatactcaggaacccaatccagatttaacaagtgaactcgaaattttttcaccagat
ccaagtccaccaggaccaccttcattcggaccaagtattgaacctactgaaccaacggag
acaacagttaatttaagtgttactgatcaagtaagtcctagtgtattggaccctgttgat
cctactgagcctgggcctactgaacctggggtattggaacccactactccagatgtaatg
aaaccggacaatccagaatcaacaaattcacaaaataaacctgaacaaacagctcctgac
aacccccagtcgggacctcaatcgccaggtgaacccactaacccagacagcaataaagaa
gaaactgcggtcaatcccactccaggcagttttatcactccgagtggtgagttgacccca
agtttagtattcgaaccaactaatccctcggatcccagcaatcccgatattcccactcct
ttggaactggaacacgggatacaaccgatttaccccgaggaatgggcagcactgattcat
gacacggggggaaagccaccgcggagaattcctttccataatccaaatcacttcaatcaa
gccaataataaccaaaatgtaaatgacgaggatactgaccaatcctctgaatacgaggac
actgagcaatcctccgaatatgtagaaaacgactacgttgatgatgcagatcctgatgac
gatcaagaaacggatgagaatgatgacgaaaaagatgacgatgacggaggatatgagagc
aattccatagctgaaggcacgaacgacaaaggtagaaggagaggtagtatagccaggagt
tatgaagaagacgattatgaggaatcgtatcgagacggttccatcgagaagaatgtgcag
gtctgggatgaaagtagggacaacgatggcaggagctatgaagatgattacgtggatgat
aacgaggaccagtacagcaagttttacgaggaggagtactaccgtttcaggaggaaaaag
agcttgaaaaacacaacggagacggcgaggtga
DBGET
integrated database retrieval system