Halalkalicoccus jeotgali: HacjB3_00795
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Entry
HacjB3_00795 CDS
T01271
Name
(GenBank) Hef nuclease
Organism
hje
Halalkalicoccus jeotgali
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
RNA_helicase_helical
DEAD
ResIII
HHH_5
HHH_2
HHH
AMPK_alpha_AID
Ribosomal_S30AE
5_3_exonuc
DprA_N
Motif
Other DBs
NCBI-ProteinID:
ADJ13552
UniProt:
D8J4J0
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Position
complement(160823..163222)
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AA seq
799 aa
AA seq
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MAATDEQVPRVDHPLLTPGFIERRLYQIQLAGRAKTAHTLVCLPTGLGKTTVSLLVTAER
LNDVGGKSLFLAPTKPLVEQHAEFYREALEIPDEEIVVFTGEVRPDDRAALWDDSKIVIA
TPQVVENDLVGGRISLADVTHLTFDECHRATGDYSYVYIAERYHGDAENPLVTGMSASPG
GDEEAILEVCENLGISEVEVMTEEDSDVAEYTHDTEVEWKRIEVPEEIIEIRDALNEVVK
DRLEKLKEIGVIGSARVDISRKELFGVRSELQKLIQNDQSEGYTGMSIHAEVMKLKHAVE
VVESQGVEALEAYFERLRNEARSSGASKASQRLVSEPKVREAMRRADEYDDLHPKLSETR
RLAIETLVDGGRRVIVFTEYRDTAETLTEFLGEHVDTRRFVGQGDKEGSSGMTQKEQKEV
LDDFRKGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRAIQRKGRTGRQDEGQVVVL
LAEDTRDEAYFWISRRREKEMESELRKLKGVASEVEEQLDPSQRQLADFDAEDGGSEGDD
VDELEHGLESYEPEADDDADGSECGSEEGAIATPEPDPDGGIEIVADQRELDATIARDLS
TREGISTRLETLAVGDYVLSDRVAVERKSVSDFLDTLVGGDRSVFEQVGDMARFYSRPVV
IIEGAGLYEERNVHPNAIRGALASLAIDFGASVLRTEDEADTADLLAVIAGREQEVDDRE
VSVHGKKSSKTLAEQQEYVVGSIADIGPVTARSLLEAFGSVEAVLTASEEELMDAEGVGE
VTAGRIREVVAGRYESYIY
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacggacgaacaggtcccccgcgtggatcaccccctcctcacgcccgggttc
atcgaacgccggctctatcagatccagctcgcgggtcgggcgaagaccgcccacaccctc
gtctgtctgccgacgggactgggcaaaaccacggtgagcctgctggtcaccgccgaacgg
ctgaacgacgtcggcgggaagtcgctctttctcgcaccgacgaaaccgctggtcgagcag
cacgccgagttctaccgcgaggcgctcgaaatccccgacgaggagatcgtcgtcttcacc
ggagaggtccgccccgacgaccgggcggcgctgtgggacgactcgaaaatcgtcatcgct
accccgcaggtcgtcgagaacgacctggtcggcgggcggatctcgcttgcggacgtcacc
catctgaccttcgacgagtgccatcgcgcgaccggcgactactcatacgtctacatcgcc
gaacgctaccacggggacgccgagaacccgctcgtgacgggaatgagcgcctcgccgggg
ggggacgaggaggcgatcctagaggtgtgtgagaacctcgggatcagcgaggtcgaggtg
atgaccgaggaggattcggacgtcgccgagtacacccacgacaccgaagtcgagtggaag
cgaatcgaggtgcccgaagagatcatcgagatccgcgacgccctgaacgaggtagtcaaa
gaccgcctggagaagctcaaggagataggcgtgatcggctcggcgcgcgtcgatatctcg
cgcaaggaactgttcggggtgcgaagcgaactccagaagctcatccaaaacgaccaatcg
gagggctacaccgggatgtcgatccacgcggaggtgatgaagctcaaacacgccgtcgag
gtcgtcgaatcccagggggtcgaggccttggaggcgtacttcgagcgcttgcgcaacgag
gcccgttcttcgggagcgtcgaaggcgagccagcgcctcgtcagcgaacccaaagtccga
gaggcgatgcgccgggccgacgagtacgacgacctccacccgaagctctccgaaacccgc
cggctcgccatcgagacgctggtcgatggcgggcgccgggtgatcgtcttcaccgagtac
cgcgacaccgcagagaccctcaccgagttcctgggcgagcacgtcgacacccggcggttc
gtcggccagggcgacaaggagggcagctcagggatgacccagaaggaacagaaggaggtg
ctcgacgactttcgtaagggggagttcgaggtgctggtctcgacgtcggtcgcagaggag
ggcttggacgtcccggaggtcgatctcgtgctcttttacgagccggtcccgacggccatt
cgggcgatccagcgcaagggccgaaccggccggcaggacgagggacaggtcgtcgtcctg
ctggccgaggacacccgcgacgaggcgtacttctggatctcacgccggcgcgaaaaggag
atggagtccgaactgcggaaactgaagggcgtcgcgagcgaggtcgaagagcagctcgat
ccgagccagcgccagctcgcggacttcgatgccgaggacgggggaagcgaaggggacgac
gtcgacgagctagagcacggactggagtcctacgaaccggaagcggatgacgacgcggac
ggctcggaatgtggatctgaggaaggggcgatcgcaacgcccgagccggatcccgacggg
ggaatcgagatcgtcgccgaccagcgcgaactcgacgcgacgatcgcgcgcgacctctcg
acgcgcgaggggatcagcacgcgcctcgaaacgctcgcggtcggcgattacgtcctctcg
gaccgggtggcggtcgaacgcaaatccgtctccgacttcctcgatacgctcgtcggcggg
gatcggtcggtcttcgagcaggtcggagacatggcgcgtttttacagtcggccggtagtg
atcatcgagggcgcgggactttacgaggaacgaaacgtccacccgaacgccattcggggg
gcgctcgcgagcctcgcgatcgacttcggcgcgagcgtgctccgcacggaggacgaagcc
gacacggcggacttactcgccgtgatcgccggacgcgaacaggaggtcgacgaccgggag
gtcagcgtccacggcaagaagtcctcgaagacgctcgccgaacaacaggagtacgtcgtg
ggctcgatcgcggacatcggccccgtgaccgcccgttcgcttctcgaagcgttcggcagc
gtcgaggcggtactgaccgcgagcgaggaggaactgatggacgcggagggcgtcggcgag
gtaactgcgggtcgaatccgtgaggtcgtcgccggtcggtacgaatcctatatatactga
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