Halorubrum lacusprofundi: Hlac_0195
Help
Entry
Hlac_0195 CDS
T00856
Name
(GenBank) type II secretion system protein E
Organism
hla
Halorubrum lacusprofundi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
Herpes_US12
Motif
Other DBs
NCBI-ProteinID:
ACM55800
UniProt:
B9LRH7
LinkDB
All DBs
Position
1:complement(211042..212994)
Genome browser
AA seq
650 aa
AA seq
DB search
MSFDLPSLSRLGGDDTSLRSLPWLDGDTDSCQCDPSFREPVGTGVDDRVVLSVDADDCPG
RGDLAASPACLATVVETLTERDADVIRTHHAGRERTYAGRAAACLIAAGRFREQIEFHET
RLAERVTREPIEAAREASGREGPPKRIAAETGLAETVASAEETGDVLRAHAGPTIAATRI
ASAPPPDAALVDRWEIDTGATVRLYEGAGPLRTYHLTPPSARLDDEAVERLADAKDRLLD
DPTGGDRAPGRAVRSIASAGDPVSTLVDVLRRHTRGYGAFEHVFADDRVSDATLSAPVAE
NPLRVVVDGERCRTNVRLPPEGAATLASRLRRTSGRGFSRASPTLDATIEAEAGRVRVAA
TTAPASDGLSFTFRRGDPDAWTLARLVDGGTITPAAAGLLSVAVKRGVTGLVAGGRGAGK
TTALGSLLWELPAETRSILIEDTPELPAAAVTAAGRDTQRLRVGDGAEPSPSEAVRTALR
LGGGAIVVGEVRGEEAAALYEAMRVGAAGEAVLGTIHGEDPAAVRERVVTDLGVSPSSFA
ATDLIVVLDDHRVETIAEVVGHDGEASFEPLFERTGSGLVSTGRIDRGESRLVESLAETD
ESYASVRDAVDRRGERIGEAARTGRITPERYVGRDGDGWQRTDSLGGGNQ
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgatctcccttcgctgtcgcggctcggtggcgacgacacgtcgctgcgctcg
ctcccgtggctcgacggcgacacagatagctgtcagtgcgatccatcgttcagagagcca
gtcgggaccggtgttgacgaccgagtggtcctttcagtggacgccgacgactgccccggg
cgcggcgacctcgcggcgagccccgcctgcctcgcgacggtcgtggagacgctgacggag
cgcgacgccgacgtgatccggacgcaccacgcgggccgagagcgaacctatgccgggcgg
gccgcggcgtgcctgatcgccgccgggcggttccgagagcagatcgagttccacgagacg
cggctcgcggagcgcgtgacccgagagcctatcgaggcagcgcgggaggcgagcggccgc
gagggaccaccgaagcggatcgccgcggagaccggactggccgagaccgtcgctagcgct
gaggagaccggcgacgtgttgcgagcgcacgccggtccgacgatcgcggccacgcgcatc
gcgtcggcgccgccgccggatgcggcgctcgtcgaccgatgggagatcgataccggcgcg
accgtgcgactgtacgagggagcgggaccgcttcggacgtaccacctcacgcccccctcg
gcccggctcgacgacgaggccgtcgagcggctcgccgacgccaaagaccgactgctcgat
gacccaaccggcggcgacagggcaccagggcgagcggtgcggtcgatcgcgtcggccggt
gaccccgtctcgacactggtcgacgtgcttcgacgacacacgcgcggatacggcgcgttc
gagcacgtgttcgctgacgaccgcgtgagcgacgcgacgctgtcggcgcccgtcgccgag
aatccgcttcgggtggtcgtcgacggggagcggtgtcgcaccaacgtcaggctgccgccg
gagggggcggcgacgttggcgtcccgccttcggcggacgagcgggcgagggttctcccga
gcaagtcccacgctcgacgcgacgatcgaggccgaagccggtcgagttcgggtcgcagcg
acgacggcccccgccagcgacggcctctcgtttacgttccgccgcggtgacccggacgcg
tggaccctcgcgcggctcgtggatggagggacgatcacgcccgcggccgctgggctcctt
tccgtggccgtcaagcgaggcgtgactggactcgtggccggcggccgcggcgcggggaag
acgaccgcgcttgggtccctcctctgggagctgccagccgagacgcgatcgatattgatc
gaggatacgccggagctgccggccgccgcggtgactgcggccgggcgcgacacccagcgg
ctccgagtgggtgacggcgcagagccgtcaccgagcgaggcggtgcgaactgccctccgg
ctcggcggtggtgcgatcgtcgtcggcgaggtccgcggcgaggaggcagcggcgttgtac
gaggcgatgcgcgtcggcgcggccggcgaggcggtcctcgggacgatccacggcgaggac
cccgccgcggtccgagagcgggtcgttaccgatctcggcgtctccccatcctcgttcgct
gcgaccgatctgatcgttgtgctcgacgatcatcgcgtcgagacgatcgccgaggtcgtc
ggtcacgacggcgaggcctcgttcgagccgctgttcgagcgaaccggatcagggttggtc
tctaccggccggatcgatcgcggggagagccggctcgtcgagtcgctcgcagagaccgac
gaatcgtacgcatccgtccgcgacgccgtcgatcggcggggagagagaatcggtgaggca
gcgagaaccggccggatcacgccggagcgctacgtcggccgcgacggcgacggctggcag
aggacggacagcctcggcggtggcaaccaatga
DBGET
integrated database retrieval system
