Halobiforma lacisalsi: CHINAEXTREME04120
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Entry
CHINAEXTREME04120 CDS
T04669
Name
(GenBank) Hef nuclease
Organism
hlc
Halobiforma lacisalsi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
Helicase_C
RNA_helicase_helical
DEAD
ResIII
HHH_2
HHH_5
HHH
Helicase_C_2
5_3_exonuc
AMPK_alpha_AID
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
APW97005
UniProt:
M0LMJ0
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Position
882511..884997
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AA seq
828 aa
AA seq
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MAATDEEPPTIEHPLLEPDFLERRLYQLKLAGTAADHHTLVCLPTGLGKTTVSLLVTARR
LKEVGGKSLMLAPTKPLVQQHATFYREALQIPDEEIVVFTGDVSPDDRAATWEEATVVMA
TPQVIENDLVGSRISLADVTHCTFDECHRATGDYAYNYIAERYHADATDPLVTGMSASPG
GDEEAILEVCENLGIEEVEVMTEEDADVSEFTHETDVEWERIDLPEEVLEIRDALNEVIK
ERLEKLKELGVASSTQPDQSQKELNAMRAELQKLINNDQSEGFEGMSIHAEVMKLRQAVT
LVETQSVEAVRRYFERQRNQAQSSGASKASQRLVSDPRVREAMRKAEDFDQLHPKYRKTR
MLLAETLGLEDGERVIVFTESRDTAEALTDFLSESFEAKRFVGQGDREGSDGMTQTEQQE
VLDEFRAGEFEVLVSTSVAEEGLDVPEVDLVLFYEPVPTAIRSIQRKGRTGRQSEGRVVV
LMAEDTRDEAYFWISRRREKEMESELRELKGMADDLEEELDDSQRALTEFESEAEVKSEG
DDPDAVTGSSSGSEGVGERPGLQEFTGEGDGDGDGDDDGGTERADSTDGGPEPEEAGREV
ETHEPSADGEGIEIVADQREMDATIARDLSKREEIDVRLETLEVGDYVCSDRVVVERKSV
ADFVDSLVGGDRSMFEQVGAMARHYSRPIVIVEGEGLYEQRDVHPNAVRGALSSLAVDFD
ASVLRTEGESETTELLAVIAGREQETSDREVSVHGEKQSKTLAEQQEYVVSSIAEIGPVT
ARSLLEEFGTVEEMMIATEEELQEADGVGQVTAERIREVVGNEYTGSR
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgaccgacgaggaaccccccaccatcgaacacccgctgctcgagcccgacttc
ctcgagcgccggctctaccagctgaagctcgcgggcacggcggcggaccaccacacgctc
gtctgtctccccacggggctggggaagacgaccgtgagcctcctggtgaccgcacgccgg
ctcaaggaggtcggcgggaagtccctgatgctcgccccgacgaagccgctcgtccagcag
cacgcgaccttctaccgggaagccctccagatacccgacgaggagatcgtcgtcttcacc
ggtgacgtcagccccgacgaccgcgccgcgacctgggaggaggcgacggtcgtgatggcg
accccgcaggtcatcgagaacgacctggtcgggagccggatctcgctcgccgacgtcacc
cactgcacgttcgacgagtgccaccgcgcgaccggcgactacgcgtacaactacatcgcc
gagcgctaccacgccgacgcgacggatcccctggtgaccgggatgtcggcctcgccgggc
ggcgacgaggaggccatcctcgaggtctgcgagaacctgggcatcgaggaggtcgaggtg
atgaccgaggaggacgccgacgtctcggagttcacccacgagaccgacgtcgagtgggaa
cggatcgacctccccgaggaggtcctcgagatccgcgacgctctcaacgaggtgatcaaa
gaacgtctcgagaagctcaaggaactcggcgtcgcgagttcgacccagcccgaccagtcc
cagaaggaactgaacgcgatgcgcgccgaactccagaagctgatcaacaacgaccagtcc
gaggggttcgaggggatgtccatccacgcggaggtgatgaagctccgccaggcggtcacc
ctcgtcgagacccagagcgtcgaggcggtccgccggtacttcgagcgccagcgcaaccag
gcccagtcctcgggcgcgtcgaaggccagccagcggctggtctcggacccccgcgtccgc
gaggcgatgcgcaaggcggaggacttcgaccaactgcaccccaagtaccgcaagacgcgg
atgctgctcgcggagacgctgggcctcgaggacggcgagcgggtgatcgtcttcaccgaa
tcccgcgacaccgcggaggccctgaccgacttcctctccgagagcttcgaggccaagcgg
ttcgtcggccagggcgaccgcgagggcagcgacgggatgacccagacggaacagcaggag
gtcttagacgagttccgcgcgggcgagttcgaggtgctggtctcgacgtcggtcgccgag
gagggcctggacgtgccggaggtcgacctcgtgctcttctacgaacccgtccccacggcg
atccggtcgatccagcgcaagggtcggaccggccgccagtccgagggccgggtcgtcgtc
ctcatggccgaggacacccgcgacgaggcctacttctggatctcgcggcggcgcgagaag
gagatggagtcggaactgcgcgagttgaaggggatggccgacgacctcgaggaggaactg
gacgattcccagcgggcgctgacggagttcgagagcgaagcggaagtgaaatccgagggc
gacgatcccgacgccgtcaccggatcttccagcggaagcgaaggggttggcgagcggccg
gggttacaggagtttaccggggagggggacggcgacggcgacggcgacgatgacggcgga
accgagagggctgactcgaccgacggcggccccgaacccgaggaggcgggccgcgaggtc
gagacccacgagccgtccgccgacggggaggggatcgagatcgtcgccgaccagcgggag
atggacgccaccatcgcccgggacctctcgaagcgcgaggagatcgacgtccgcctcgag
acgctcgaggtcggcgactacgtgtgctcggatcgggtcgtcgtcgagcgcaagtccgtc
gccgacttcgtcgactcgctggtcggcggcgaccggtcgatgttcgaacaggtcggcgcg
atggcccgccactactcccggcccatcgtgatcgtcgagggcgaggggctgtacgaacag
cgggacgtccaccccaacgccgtccgcggggcgctctcgagtctcgcggtcgacttcgac
gcgagcgtgctgcggaccgaaggcgagtcggagacgaccgaactgctcgcggtgatcgcg
ggccgggaacaggagacgagcgaccgcgaggtctccgttcacggcgagaagcagtcgaag
acgctggccgaacagcaagagtacgtcgtctcctcgatcgccgagatcggccccgtcacc
gcgcggtccctgctcgaggagttcggcaccgtcgaggagatgatgatcgcgaccgaggag
gagctacaggaggccgacggcgtcggccaggtcacggccgagcggatccgggaggtcgtc
gggaacgagtacacgggctcgaggtga
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