Halobiforma lacisalsi: CHINAEXTREME09615
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Entry
CHINAEXTREME09615 CDS
T04669
Name
(GenBank) Patched family protein
KO
K07003
uncharacterized protein
Organism
hlc
Halobiforma lacisalsi
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
CHINAEXTREME09615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMPL
SecD_SecF
Patched
Sterol-sensing
Spectrin
Taxilin
DUF3450
Leu_zip
GAS
ACR_tran
SHE3
Motif
Other DBs
NCBI-ProteinID:
APW98022
UniProt:
M0L643
LinkDB
All DBs
Position
complement(2005268..2008558)
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AA seq
1096 aa
AA seq
DB search
MSLPEQLAGVVTNRSRTVFVVLLLATALVGAGAPMVDDDSSLEQFETDSPEAEAMEEIDD
RFVASDEENTTGVQLINREGNVLTRESLLESLEFQQEIRDNESINETLVDEEPITGVENL
VAITAITNEEIEDLEERGDDLEERGEELEERSADLEERGEELGQRQAELEATSAELEAGI
DEARDLQREYEQLEETYDEDDPEYQQGVDEIEAEYEALLEEVTASADLDDERAAEYEAFA
DQAREIESQLYGIEQSTDDPESVPEYGELNEQLEGVYAGATTGILEEEYAALEEDSEQLE
ADQQQLEEDFEEFEADQEALEDDWQELEEDDGRPSLEEQIETLEEIDDEAFEEALDETLS
DDDDGGAGLAFMPSDYDPGSTEADARMTSITQETAGESLEMGAAADSDEGVVQAQLDLRE
LATAHDHDQIVFGAGVITDEIDRSMGDSLAIVSPLALAFVAAALLIAYRDPLDIALGLVG
IVAVLVWTFGFMGWTGIAFNQMFVAVPVLLIGLSIDYAIHVFMRHREQRETQRRSDRSAG
RDPETGSSAIRSSMTIALAGVGVALVWVTATTAIGFLANLVSPIQPIREFGVVSAVGILA
ALVVFGGLIPAAKVEIDSLLEDRGYDRHKRAFGTGGGRFSTVLSAGSVAARRIPLALVVA
VLLLTAGGVYGASQVDTSFEEEDFLAQSPPDWTENLPAAMAPGEYQAADDLDYINANFQR
QDAQAQILVEGDVADGDVLEELEAARNEAADSPVAYTLANGDADVRGPLSVMEETAARNE
SFNESFEAADTTGDGVPDENVTALYDELFEANEEGARDVLHRTDGGEYDSARLIVATDGE
ATFAETTDEMRAIAAGLEDGDARVSAIATGDPIVNYIVEQDLFDTVLQSLLVTLVAVFLF
LTAAYWLTGNSATLGTVTLLPVAFATSWILGTMYLVGMPFNVLTGMITSLTIGLGVAYSI
HVSARYTLELERQGNVWSALDTTVTGTGGALLGSAATTIGGFGTLAFAILPVLRQFGIIT
ALTITYAFLASVVVLPALLVFWTRYFGPDVSFDRRRSRDPTTAASDGGLAVEEADERTDS
EGPGDGTEDADRGDRR
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcccggagcaactcgcaggcgtcgtcacgaaccgttcccgaaccgtcttcgtc
gttcttcttttggccaccgccctggtcggcgcgggggcaccgatggtcgacgacgactcc
tcgctcgagcagttcgagaccgactcgcccgaggccgaggcgatggaggagatcgacgac
cggttcgtcgccagcgacgaggagaacacgaccggcgtccagttgataaatagggagggg
aacgtcctcacccgcgagtcgttgctcgagtccctcgagttccagcaggagatcagggac
aacgagtcgataaacgaaacgctcgtcgacgaggagccgatcaccggcgtcgagaacctc
gtcgcgatcacggcgatcaccaacgaggagatcgaggatctcgaggagcggggcgatgac
ctcgaggaacgtggcgaggaactcgaagaacgcagtgcggaccttgaggaacgcggcgag
gaactcggacagcgacaggccgaactcgaggcaaccagcgcggaactcgaggccgggatc
gacgaagcccgcgacctccagcgcgagtacgagcaactcgaggagacctacgacgaggac
gaccccgagtaccagcagggcgtcgacgagatcgaagccgagtacgaggcgctcctcgag
gaggtcactgccagcgccgacctcgacgacgagcgggcggccgagtacgaggcgttcgcc
gatcaggctcgagagatcgagtcgcaactgtacgggatcgagcagtcgaccgacgacccc
gagtcggtgcccgagtacggggaactgaacgagcaactcgagggcgtctacgccggcgcg
acgaccggaattctcgaggaggagtacgcggccctcgaggaggactccgaacaactggaa
gcggaccagcagcaactcgaggaggacttcgaggagttcgaagcggaccaggaagccctc
gaggacgactggcaggaactcgaggaggacgacgggcgaccgtcactcgaggagcagatc
gagaccctggaggagatcgacgacgaggcgttcgaggaggcactcgacgagacgctctcg
gacgacgacgatgggggcgcggggctggccttcatgccctccgattacgaccccggctcg
accgaggccgacgcccggatgacctcgatcacccaggagaccgccggcgagagcctcgag
atgggtgcggccgccgacagcgacgagggagtcgtccaggcccaactcgacctgcgggag
ctggcgacggcacacgatcacgaccagatcgtcttcggcgcgggcgtcatcaccgacgag
atcgaccgctcgatgggtgacagcctcgcgatcgtgagtccgctcgcgctggcgttcgtc
gccgcggcgctgctgatcgcctatcgggacccgctggacatcgctctcggactggtcggg
atcgtagcagtactcgtctggacgttcggcttcatgggctggaccgggatcgcgttcaac
cagatgttcgtcgcggtgcccgtcctgttgatcgggctttcgatcgactacgcgatccac
gtgttcatgcgccaccgggaacagcgggagacacagcgcaggtccgaccggtccgcggga
cgcgatcccgaaaccggctcgagcgcgatccggagttcgatgacgatcgccctcgccggc
gtcggcgtcgcgctggtctgggttaccgcgaccaccgcgatcggcttcctcgcgaacctc
gtcagcccgatccagcccatccgcgagttcggcgtcgtcagcgccgtcggcatcctcgcg
gcgctcgtcgtcttcggcgggctgatccccgccgcgaaggtcgagatcgactcgctgctc
gaggaccggggctacgaccgccacaagcgggcgttcgggaccggcggcggccggttcagt
accgtcctctcggcgggatcggttgcggcgcgtcggatcccgctcgccctcgtcgtggcc
gtcctgttgctcaccgccggcggcgtctacggcgcgagccaggtcgacaccagcttcgag
gaggaggacttcctcgcgcagagtccgcccgactggaccgagaacctgcccgcggcgatg
gcacccggcgagtaccaggccgccgacgacctggactacatcaacgccaacttccagcgc
caggacgcacaggctcagatcctcgtcgagggcgacgtggccgacggcgacgtcctcgag
gaactcgaggcggcccggaacgaggccgcggacagccccgtcgcgtacacgctggcgaac
ggcgatgcggacgtccgcgggccgctgtcggtgatggaggaaaccgcggcacgaaacgag
tcgttcaacgagtccttcgaggccgccgacacgaccggcgacggcgtccccgacgagaac
gtgacggcgctgtacgacgaactgttcgaggccaacgaggaaggcgcacgcgacgtcctc
caccgcaccgacggcggcgagtacgattcggctcggctgatcgtggccaccgacggcgag
gcgacgttcgcggagacgaccgacgagatgcgcgccatcgcggccgggctcgaggacggc
gatgccagggtcagcgccatcgcgaccggcgatcctatcgtcaactacatcgtcgaacag
gacctgttcgacaccgttctccagagtctgctggtgacactcgtcgcggtcttcctcttc
ctgaccgccgcctactggctgacgggcaacagcgcgacgctcgggaccgtcaccctgttg
ccggtcgctttcgccaccagctggatcctggggacgatgtacctcgtcgggatgccgttc
aacgtgctgaccgggatgatcaccagtctcacgatcggcctcggcgttgcctacagcatc
cacgtcagcgcccgctacacgctcgaactcgagcgccagggcaacgtctggtcggcgctc
gatacgacggttaccggcaccggtggcgcgttgctcggcagtgcggcgacgaccatcggc
ggcttcgggaccctcgcgttcgcaatcctgccggtgctccgccagttcgggatcatcacc
gcgctgacgatcacgtacgcgttcctggccagcgtcgtcgtcctgccggcgctgctggtg
ttctggacgcggtacttcgggccggacgtctccttcgaccgacgccggagccgggacccg
acgacggcggcgagcgacggcgggctggcggtcgaggaggccgacgaacggacggactcc
gaaggccccggcgacgggaccgaggacgccgaccggggtgatcgacgatga
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