KEGG   Halobiforma lacisalsi: CHINAEXTREME20710
Entry
CHINAEXTREME20710 CDS       T04669                                 
Name
(GenBank) type I-B CRISPR-associated endonuclease Cas1
  KO
K15342  CRISP-associated protein Cas1
Organism
hlc  Halobiforma lacisalsi
Brite
KEGG Orthology (KO) [BR:hlc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hlc03400]
    CHINAEXTREME20710
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hlc02048]
    CHINAEXTREME20710
DNA repair and recombination proteins [BR:hlc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     CHINAEXTREME20710
Prokaryotic defense system [BR:hlc02048]
 CRISPR-Cas system
  Universal Cas proteins
   CHINAEXTREME20710
SSDB
Motif
Pfam: Cas_Cas1
Other DBs
NCBI-ProteinID: APX00233
UniProt: M0LDY2
LinkDB
Position
pHLAJ5I:complement(80553..81548)
AA seq 331 aa
MTKPNHHIFADGELSRNEGTLRIDTLDGETEYLPIESIDTLYLHGQIDFNTRALGLLNEH
NVPLHIFGWKDYYRGSYLPKRGQVSGNTVVEQVRAYDNLDRRLQIGQTIIEASIHNMRAN
LRYYNDRQGNFSTELEDLEELKNSAAGTTDINELRSVEGRARKTYYGCFDRILRSPFTLT
QRKYNPPTNEANAVISFLNGMVYTTSVSAIRKTALDPTVGFVHEPGERRFTLSLDIADIF
KPILADRLLFRLVNRKQLSIDDFEEELEGCLLDEKGRMTVLEEFEETLDKTIDHPRLNRK
VSFKTLVQTDVYSLKKHVLTDEPYHATERWW
NT seq 996 nt   +upstreamnt  +downstreamnt
atgacaaaaccaaatcaccatattttcgctgatggagagttatcgcggaatgaagggaca
ctacggatcgatacattagacggggagacagaatacctccccattgaatccattgataca
ttgtatttgcacggacagatcgatttcaatacgcgtgcacttggtctgttgaatgagcac
aacgtacctctacacatatttggatggaaagactactatcgtggttcctacctcccgaaa
cgaggacaggtgtcggggaataccgtcgttgaacaagttcgagcatatgataatctagac
cggcgacttcagatcggtcagaccattatcgaagctagtatccacaatatgcgagcgaat
ctccgatattacaatgaccgacaaggcaatttctcaactgaacttgaggatctcgaggaa
ttgaaaaattctgctgctgggacaacagatattaacgaacttcgttcggtcgaaggacgt
gcccgaaagacctactacggatgttttgaccggattcttcgtagcccatttacgctaact
cagcgaaaatataatcctcctacaaatgaagcaaatgcagtaatatcgttcctgaatgga
atggtatatactaccagtgtttcggccattcggaagacagcgctcgatccgacggtgggt
tttgttcatgaacctggagaacgccgattcacactctccctcgacattgcagacatattc
aagccgattctagctgatcggctactattccggttagtcaatcgaaaacaattgtctatt
gatgactttgaagaagaactcgagggctgtctgttagatgaaaagggacgaatgaccgtc
cttgaagagtttgaggaaactcttgataagactattgatcaccctcgtttgaatagaaag
gtaagtttcaaaacgctggtccagactgatgtttacagtctgaaaaagcatgtattaacg
gatgaaccttaccacgcaactgaacggtggtggtga

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