Haliaeetus leucocephalus (bald eagle): 104829043
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Entry
104829043 CDS
T08630
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104829043 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hle03041
]
104829043 (PRPF40A)
Spliceosome [BR:
hle03041
]
Complex A
U1 snRNP components
U1 related factors
104829043 (PRPF40A)
Complex B
104829043 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
Motif
Other DBs
NCBI-GeneID:
104829043
NCBI-ProteinID:
XP_010561361
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MPFGPSSRQPLRGRLLGRCSGGSLLSPSMRPGGVDRGSLMMGHPGMPHYPPMGMHPMGQR
PPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGMMMSHMSQAAMQPTVPPGVNSMD
AQVGVTPPGTQSSVLFRPQTTHPVVCAAQQTATTNSSVNEEHSKQKSTWTEHKSPDGRTY
YYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELED
LEAMIKAEENSTKPEESTPTPSASAAAAEAANATTTATTAAEAAAAVSTTTATSAAAAAP
EAETAAASSVVENESTGTAAAEEQGQATSAPAVQEQSAETAANAADDSSKQEASADAASK
KEDDDAQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLS
EKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEV
WNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYCTTWSEAQQ
YLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQ
LFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPVFSSGSTALDLFKFYVEDLKAR
YHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIKLAFNSLLEKAEAR
EREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKEPAFEDITLESERKR
IFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSESEDDDSHSKKKRQRSESR
SVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDIEREKDKKERESEKDRARQRSE
SKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgccctttggcccctcgtcgcggcagccactcagagggcggcttcttggcaggtgcagc
ggcggcagcctgctgagcccctcgatgcggcccggcggcgtcgaccgcggctccctcatg
atgggacacccaggcatgccacattatcctcccatgggaatgcaccctatgggtcagaga
ccaccaaatatgccgccagttccacacggtatgatgcctcagatgatgccccccatggga
ggaccaccaatggggcagatgcctggaatgatgcagtcagtaatgcctggaatgatgatg
tctcacatgtctcaagctgctatgcagcctacagttccgccaggggtgaacagtatggat
gcacaagtaggtgtaacacctcctggaactcagagctctgttttgtttcgccctcagaca
acacatcctgtagtttgcgcagcccagcaaaccgccacaaccaacagttctgttaatgaa
gagcactctaaacagaaatctacatggacagaacacaaatcacctgatggaagaacatat
tactataatactgaaacaaagcagtctacctgggagaagccagatgatctcaaaacacct
gctgagcaattgttgtctaaatgtccctggaaagagtataaatctgattccggaaagccc
tactattataattcccaaacaaaggaatcacgctgggcaaaacccaaagagcttgaggat
cttgaagcaatgattaaagctgaagagaacagcacaaagcccgaagaatcaactccaaca
ccatctgcttcagctgctgcagcagaagcagcaaacgcaaccaccacagccacaactgct
gctgaagctgccgcagctgttagtaccaccactgctacttctgcagcagcagcagcccct
gaagcagaaactgctgcagcttcttctgtggtagaaaatgagagtactggcacagccgca
gctgaggaacagggacaagcaacttctgcacctgctgtgcaggaacagagtgcagaaact
gcagctaacgcagcagacgactcttccaagcaggaggcctcagcagatgctgcttcaaag
aaagaggacgacgatgcccaaccagttaaaaaaacctatacatggaatacaaaggaagaa
gcaaagcaagcgtttaaagaactgttaaaagaaaagcgagtaccatccaatgcctcttgg
gagcaagctatgaaaatgatcattaatgatcccagatacagtgctttggcaaaattaagt
gaaaaaaagcaagcctttaatgcttacaaagttcaaacagaaaaagaagagaaagaagaa
gcaagatcaaaatacaaagaagctaaagaatccttccagcgttttcttgaaaaccatgaa
aagatgacatccacaacaagatacaaaaaagctgaacaaatgtttggggagatggaagtc
tggaatgcgatatctgagcgtgatcgtcttgaaatttatgaagatgtcttgttttttctc
tctaagaaagagaaggaacaagccaaacagttaagaaagaggaattgggaagctttgaag
aacatactagataacatggctaatgtcacttactgtactacttggtcagaggctcagcag
tatctgatggataatcctacatttgcagaagatgaggaacttcagaacatggataaggag
gatgcactgatctgttttgaggaacatatcagggcattggaaaaggaggaggaagaagaa
aaacagaaaagtttgcttagagaaagaaggcgacagcgcaaaaatagagaatcttttcag
ctatttttagatgaattgcatgagcatggacaattacattccatgtcctcttggatggag
ttgtacccaaccataagctctgacatcagattcacaaatatgcttggtcaacctgttttt
tcatcaggatcgacagcacttgatcttttcaagttctatgttgaagacttgaaagcacgc
taccatgatgaaaagaagataataaaagatatcttaaaggataaaggatttgtggttgaa
gtgaatacttcttttgaagattttgttacggtcatcagttcaactaaaagagctactact
ttagatgcaggaaatatcaagctggctttcaacagtctgctagaaaaggcagaagcccgt
gaaagagagagggaaaaagaagaagctcgcaaaatgaagcggaaagagtctgccttcaag
agtatgttgaagcaagctactcctccaattgaattggacgctgtctgggaagatatcaga
gatagatttgtgaaggaaccagcatttgaagacatcactctggagtctgaaagaaaaaga
atatttaaagatttcatgcatgtactagagcacgagtgtcagcatcatcattcaaagaat
aagaaacattctaaaaagtctaaaaaacatcacaggaagcgatcacgttctcgttcgggc
tcagaatctgaggatgatgatagccactcaaagaagaaaaggcagcggtcagaatctaga
tcagtttctgagcgttcttccagtgcagagtcggagagaagttacaagaagtcaaaaaaa
cacaagaaaaagagcaagaagaggcgacataagtctgattcaccagaatcggatatcgaa
cgagaaaaagacaaaaaagaaagagagagtgagaaggatagagctagacaaagatctgaa
tcaaaacataaatctcctactaaaaaacgacctggaaaagattctgggaactgggatact
tcgggcagcgaactgagcgaaggggagctggaaaaacagaggaggactcttttggaacaa
ctggatgaagatcaatga
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