Haliaeetus leucocephalus (bald eagle): 104839950
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Entry
104839950 CDS
T08630
Symbol
SKIV2L2
Name
(RefSeq) superkiller viralicidic activity 2-like 2 isoform X1
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104839950 (SKIV2L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hle03019
]
104839950 (SKIV2L2)
03041 Spliceosome [BR:
hle03041
]
104839950 (SKIV2L2)
03009 Ribosome biogenesis [BR:
hle03009
]
104839950 (SKIV2L2)
03016 Transfer RNA biogenesis [BR:
hle03016
]
104839950 (SKIV2L2)
Enzymes [BR:
hle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104839950 (SKIV2L2)
Messenger RNA biogenesis [BR:
hle03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
104839950 (SKIV2L2)
Spliceosome [BR:
hle03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
104839950 (SKIV2L2)
Complex C
U4/U6.U5 tri-SnRNP related factors
104839950 (SKIV2L2)
Ribosome biogenesis [BR:
hle03009
]
Eukaryotic type
Pre-60S particles
Helicases
104839950 (SKIV2L2)
Transfer RNA biogenesis [BR:
hle03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
104839950 (SKIV2L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
ResIII
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
104839950
NCBI-ProteinID:
XP_010578876
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MADAFGDELFSVFEEDSAAAAASGAKKSKAGATEGARRPGRQLEEKSSVAVAGKPKREIE
VDGTEDAVLGKKPKLEDVVSEDANLADLMPQVKVQAVETVEGCTHEVALPADEVFTGLKP
RTGKAAKEYPFILDAFQREAILCVDNNQSVLVSAHTSAGKTVCAEYAIALALRDKQRVIF
TSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVA
WVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVI
YTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLRDAGDLAKGDQKGRKGG
MKGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNA
IDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAM
GINMPARTVLFTSASKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTI
GKQLLKGSADPLNSAFHLTYNMVLNLLRVEEINPEYMLEKSFYQFQHYRTIPEIVERVSN
LEGQYNKIAIPNEENVVIYYKIRQQLAKLGKEIEEYVHKPKYCLPFLQPGRLVKVKNEGD
DFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLHCSKESLKNAATEAAKPARPDEKGEMQ
VVPVLVHLLSAISSVRLYIPKDLRPIDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIKD
QGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYKLCEKKAQIAMDIKAAKRELKKARTVLQ
MDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATA
LLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEENYLNSFRPNLM
DVVYTWANGANFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGI
TKIKRDIVFAASLYL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcgtttggggacgagctcttcagcgtgtttgaggaggactcggccgccgct
gccgcctccggcgccaagaagagcaaagcgggcgccaccgaaggcgccaggagaccggga
agacaactggaggaaaaatcttcagtggctgtggcagggaagcccaaaagggaaatcgag
gtcgatggtactgaagatgccgttttgggaaagaagccaaaattggaagacgttgtatca
gaagatgctaatctggcagacctgatgcctcaagtaaaggtgcaagctgtggaaactgtt
gaaggttgtacacatgaggttgcacttccagcagatgaagtcttcacaggtctgaagcca
agaactggaaaagctgcaaaagaatatccatttattcttgatgcctttcagagagaagct
attctttgtgtagataataaccagtctgtgttagtgtcagctcatacctcagctggtaaa
actgtttgtgcagagtatgcaattgccttggctttgagggataaacagcgtgtgatattt
acgagtccaattaaagctttgagtaatcagaagtaccgtgaaatgtacgaagaatttcag
gatgttggtttgatgactggggatgtcaccattaatcctacagcttcttgtctggtaatg
acaaccgagattttgagaagtatgctctacagaggttctgaggttatgcgagaagtcgca
tgggttatttttgatgaaatccactacatgagagattcagaacgtggtgtggtttgggaa
gagacaattattttgctccctgacaatgttcattatgtgttcctttctgcaactattcca
aatgcccgtcagtttgctgaatggatctgccatcttcacaaacagccttgccatgtgatt
tacaccgactatcgacccactccactgcagcattatatattcccagcaggaggagatgga
ctccatctggttgttgatgaaaatggagatttcagagaagataattttaatacagcaatg
caagtgcttagagatgcaggagacttagcaaaaggggaccagaaaggcaggaaaggagga
atgaaaggtccttcaaatgtttttaagattgtgaagatgatcatggaaaggaatttccaa
cctgtgattattttcagcttcagtaagaaagactgcgaagcctatgcacttcagatgaca
aagttagatttcaatacagatgaagaaaaaaagatggtagaagaagtgttcaataatgca
attgattgtctgtcagatgaagacaaaaagcttcctcaggttgagcatgtgcttcctctt
ctgaagcgaggaattggtatccatcatggtggtctacttcctatcttaaaagaaaccata
gaaattcttttctctgagggcctaataaaggccttatttgcaacggagacttttgctatg
ggaattaatatgccagccaggactgtactatttacgagtgccagcaaatttgatggaaaa
gatttccgatggatatcctcaggtgaatacattcaaatgtcaggtcgtgcaggacgccga
ggtatggatgacagaggaatagtaattcttatggtggatgaaaaaatgagtccaacaatt
ggcaagcagcttttgaagggttcagctgatcctttaaacagtgcattccacctgacatac
aacatggtattgaacttgcttcgagtagaggaaattaaccctgaatacatgttagaaaaa
tccttctatcagttccagcattacagaactattccagaaatagtagaaagagtgagtaat
ttggaaggacagtacaacaaaatagcaattcccaatgaagaaaatgtggtcatatactac
aaaatccgacagcagcttgcaaaactgggtaaagagattgaagaatatgttcacaaacca
aagtattgcttgccatttctacagccaggaagactggtaaaggtgaagaacgaaggtgat
gactttggatggggagtggttgttaatttctctaagaaatcaaatgttaagccaaattct
ggtgaattggacccattatatgtagttgaagtgctactgcactgcagcaaagagagtttg
aaaaatgctgctactgaggctgcaaagccagccagacctgatgagaaaggcgagatgcag
gttgttcctgttttggtacatctcctctcagctatcagcagtgtccgactttacataccg
aaagacctgaggcctattgacaacaggcaaagtgtgttaaaatctatacaggaagtacag
aagcgatttcctgatggagtaccattactagaccctattgatgacatgggcatcaaagat
caaggactgaaaaaagtaatccaaaaagtagaggcatttgagcataggatgtattcacat
cctcttcacaatgatcccaacttggaaactgtatacaaactttgtgaaaaaaaagcacag
attgctatggatattaaagcagcaaagcgagaactgaaaaaagccagaactgtcttacaa
atggatgaactcaaatgccgcaagcgtgttttgagaagactggggtttgccacgtcttca
gacgttattgagatgaaaggacgggtcgcttgtgaaatcagcagtgctgatgaactactc
ttgacagaaatgatgttcaatggtctcttcaatgacttatctgcagaacaggcaactgca
ctactaagctgtttcgtatttcaagagaactccagtgaaatgccaaaattgacagagcag
ttggcaggaccacttcggcaaatgcaggagtgtgcaaaaagaattgccaaggtgtcagca
gaagcaaaactggaaattgatgaagaaaattacttaaattctttcagacccaacctgatg
gatgttgtgtatacatgggcaaatggagctaactttgctcacatctgcaaaatgactgat
gtctttgaagggagcataattcggtgcatgagaaggctagaagaattgcttcggcagatg
tgccaggctgcaaaagccattggaaacacagagttggaaaataagtttgcagaggggatt
acaaaaatcaagagagatattgtgtttgctgcaagcctttacctgtaa
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integrated database retrieval system
