Halobellus limi: DV707_00820
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Entry
DV707_00820 CDS
T05944
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
hlm
Halobellus limi
Pathway
hlm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hlm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DV707_00820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlm03400
]
DV707_00820
DNA repair and recombination proteins [BR:
hlm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DV707_00820
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DV707_00820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
AAA_30
HEM4
DUF87
Motif
Other DBs
NCBI-ProteinID:
QCC46337
UniProt:
A0A1H5WTW3
LinkDB
All DBs
Position
complement(166878..169004)
Genome browser
AA seq
708 aa
AA seq
DB search
MSDTSGSSPLSPDEPAAERAFRVDAPFEPAGDQPDAIEQLAEGFESGMEKQTLLGVTGSG
KTNTVSWTIEALQQPTLVIAHNKTLAAQLYEEFKNLFPDNAVEYFVSYYDYYQPEAYVEQ
TDTYIDKDMSINEEIDRLRHSATRSLLTREDVIVVASVSAIYGLGDPKNYTDMALRVERN
ERLDRDELLAKLVDLNYERNDVDFQQGTFRVRGDTVEVYPMYGRYAVRIEFWGDEVDRLT
KLDPLNGEVVSEEPATLIHPAEHYSIPEEQLEEAISEIEQLMEERVKYFERQGDLVAAQR
IEERTTFDIEMLRETGYCSGIENYSVHMSDRDTGEAPYTLLDYFPEDFLTVVDESHQTLP
QIRGQYAGDKSRKDSLVENGFRLPTAYDNRPLTFEEFEEKTDRTLYVSATPGDYEREQSE
QIVEQIVRPTHLVDPAIEVEDATGQVDDLLDRIDERIEREERVLVTTLTKRMAEDLTEFL
EESGVDVAYMHDETDTLERHELIRDLRLGNIDVLVGINLLREGLDIPEVSLVAILDADQE
GFLRSETTLVQTMGRAARNVEGEVVLYADETTDSMAAAIEETQRRRRIQREYNEEHGFEP
KTIEKAVGETNLPGSGDRSERSPTDEPSDGDEAREQIAYLEERMSEAADNLEFELAADIR
DRIRELRQEFGIREDDEESRGDDGVDPGVDPLDETDRSVDDGIPPEDG
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacctccgggtcgagtccgctctcgcccgacgagccggccgcagagcgggcg
ttccgcgtcgacgccccgttcgagccggcgggcgaccagcccgacgccatcgagcaactg
gccgagggcttcgagtcgggaatggagaaacagaccctcctgggcgtcacgggatcgggc
aagaccaacaccgtctcgtggacgatagaggcgctccagcagcccacgctggtcatcgca
cacaacaagacgctcgccgcgcagctttatgaggagttcaagaacctctttccggacaac
gccgtcgagtacttcgtctcctactacgactactaccagccggaggcctacgtcgaacag
accgacacctacatcgacaaggacatgtcgatcaacgaggagatcgaccggctgcgacac
tccgcgacgcggtcgcttctgactcgcgaggacgtcatcgtcgtcgcctcggtctcggcg
atctacgggctgggcgacccgaagaactacaccgatatggcgctgcgggtcgagcggaac
gagcggctcgaccgcgacgaactgctggcgaaactggtcgacctgaactacgagcgcaac
gacgtcgacttccaacaggggacgttccgcgtccgcggcgacaccgtcgaggtgtacccg
atgtacggccgctacgccgtccgcatcgagttctggggcgacgaggtcgaccggctgacg
aagctcgatcccctgaatggagaagtcgtctccgaggagcccgccaccctgatccacccc
gccgagcactactcgatacccgaggagcagttagaggaggcgatctcggagatcgagcag
ttgatggaagagcgcgtgaagtacttcgagcggcagggcgacctcgtcgccgcccagcgg
atcgaagagcgcacgacgttcgacatcgagatgctccgggagacgggctactgctcgggc
atcgagaactattcagtgcatatgtccgaccgcgacaccggcgaggcgccctacacgctc
ttggattacttccccgaggacttcctcaccgtcgtcgacgagtcccaccagaccctaccg
cagatccgcggacagtacgccggggacaaatcgcgaaaggactcgctggtcgagaacggc
tttcgactcccgacggcgtacgacaaccgcccgctgaccttcgaggagttcgaggagaag
accgaccggacgctctacgtgtcggcgacgcccggcgactacgagcgcgagcagagcgaa
cagatcgtcgagcagatcgttcgcccgacccacctcgtcgaccccgcgatcgaagtcgaa
gacgccacgggccaggtcgacgacctgctggaccggatcgacgagcggatcgagcgcgag
gagcgcgtgctggtcacgacgctcaccaagcggatggccgaggacctcacggagttctta
gaggagtccggcgtcgacgtggcgtacatgcacgacgagaccgacaccctagagcgccac
gagttgatccgcgacctcaggttggggaacatcgacgtgctcgtcggcatcaacctcctc
agggagggcctcgacatccccgaggtgtcgctcgtggccatcctcgacgccgatcaggag
ggcttcctccgctcggagacgacgctcgtccagacgatggggcgggccgcgcggaacgtc
gagggcgaggtcgtcctctacgccgacgagacgaccgactcgatggccgccgcgatcgag
gagacgcagcgccgccggcggatccagcgggagtacaacgaggagcacggcttcgagccg
aagacgatcgagaaggcggtcggcgagacgaacctcccggggagcggcgaccggagcgag
cgctctccgaccgacgagccgagcgacggagacgaggcgcgcgagcagatcgcgtacctg
gaagagcggatgtcggaagccgccgacaacctcgaattcgaactcgcggccgacatccgc
gatcggatccgagagctccgacaggagttcgggatccgggaggacgacgaggagtcccgc
ggcgacgacggcgtcgatcccggcgtcgatccgctggatgagaccgaccgctcggtcgac
gacgggatcccaccggaagacggctga
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