Halostagnicola larsenii: HALLA_12285
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Entry
HALLA_12285 CDS
T03008
Name
(GenBank) XerC/D integrase
KO
K03733
integrase/recombinase XerC
Organism
hlr
Halostagnicola larsenii
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hlr03036
]
HALLA_12285
Chromosome and associated proteins [BR:
hlr03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
HALLA_12285
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_integr_3
Motif
Other DBs
NCBI-ProteinID:
AHF99445
UniProt:
W0JL25
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All DBs
Position
1374546..1375589
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AA seq
347 aa
AA seq
DB search
MATNVDSAEDVTDPIEYFLEDQRYHGKSDRTLEAYDRVLREFETYVSSEFEAVESPGDAD
RRECMAWIHSLRGNRKPSTIATYASYLNRFYDYMNRVGEFEENPMALVMEEMSESIDTNP
TRRDISVSEMRSFVDSIGHPLERAVIVTLLKTGMRVGELCNLDARDLNIDVSDIAYDLNS
RVQLERRPDSVFVSAAPARGTTVNGEERTASNKRERDTIVPVDDELSRVLLQWLAIRPDS
RSSAEPLFLDTGESWGQRLTPADIRYIVEKHARERGWYRTGGGATENVTPHYFRHFFTTH
LRDRTGDRGVVKYLRGDVASDVIDTYTHNWGDQVRTVYESNIYSLFS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaatgtcgattcagccgaggatgttaccgatccgatcgagtacttcctcgag
gaccagcgctatcacggcaagagcgatcggacgctcgaggcctacgaccgcgtccttcgc
gagttcgagacgtacgtcagttcggagttcgaggccgtcgaatcgcccggcgacgccgat
cgacgcgagtgtatggcctggattcactccctccgggggaatcgaaaacccagcacgatc
gcgacctacgcctcgtatctcaaccggttttacgactatatgaaccgagtcggagaattc
gaggagaatccgatggcgcttgtcatggaggagatgtccgaatcgatcgatacgaacccc
acgcgccgagatatctcggtttccgaaatgcggtcgttcgtcgattcgatcggccatccg
ctcgagcgagcggtgatcgtcacgctgctcaaaaccgggatgcgtgtcggcgaactctgt
aatctcgacgcgagagacctcaacatcgacgtttcggacattgcgtacgatctgaattcc
cgcgtccaactcgagcgtcgaccggactcggtgttcgtctccgcagcgcccgctcgagga
acgaccgtcaacggagaggagcgaacggcctcgaacaagcgggaacgagacacgatcgtt
cccgtggacgacgaactcagccgggtgctcttgcagtggctcgcgatccgcccggatagc
cgatcatcggcggaaccgctttttctcgacaccggcgagtcgtggggccagcgactcaca
ccagcggatattcgctatatcgtcgagaaacacgctcgagagcgcggctggtatcgcacg
ggtggtggcgcgaccgaaaacgtgacgccacactactttcgacacttcttcacgacgcac
ctccgggatcggaccggtgatcgcggcgtcgtgaagtacctccgtggagacgtcgcgagc
gacgttatcgacacgtacacccacaactggggcgatcaggttcggacggtctacgagtcg
aacatctattctcttttttcctag
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