Halostagnicola larsenii: HALLA_17430
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Entry
HALLA_17430 CDS
T03008
Name
(GenBank) DNA helicase UvrD
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
hlr
Halostagnicola larsenii
Brite
KEGG Orthology (KO) [BR:
hlr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlr03400
]
HALLA_17430
Enzymes [BR:
hlr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HALLA_17430
DNA repair and recombination proteins [BR:
hlr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HALLA_17430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_12
AAA_30
Viral_P18
Motif
Other DBs
NCBI-ProteinID:
AHG00316
UniProt:
W0JNP0
LinkDB
All DBs
Position
complement(2351761..2355513)
Genome browser
AA seq
1250 aa
AA seq
DB search
MGDRSEPAGTGPLEPKGNQRRVIESESVSTAVDAGAGTGKTTTMLMRIERAIDSGAVDPE
DVLVLTFANEAASSIREAVTERLDPEAAAAIDVYTYHSFCYQLVREYAYYLGLSPEFEVV
TERKRRRIVGRLLAETEYDFAAAPARGDSSPADLADAIDGFIATMSQEDIGPETLESRLP
SVRTLELCTEFVLWLEETATEELSFDKEAFRYFNDPDHLEAARESLIEYGKLVGFCREKI
AEAPSEFRSDPVVGTIDRYLRALQTCVTNTLEELSLEEPTTKHLPRALFGNEIWGESTGR
LEQTPFGRLKHYVEFLRLARHYTDVYADYRETLARDDAVDFDELVRTATGLLTGAGSVAD
EIANRWDHVYCDEFQDTDETQFRLIRALTEGETRPDLLAIGDKDQAIYGWRGTDREGLDR
LADTDDEHESIELELNFRSRQEILDLTNHCSYGPQESKTLRENDRTPGEYDEADPPHRLL
KVESDELPWSTPEQVARATARLLNGRVENVPRRSLEDIAIIVRTNRQAQAVADELESRRI
PFAVSGSPRGKISPGVQTVLSYLRVLVDPDADAHLRRVLLYRYRIPESDLAALARRGDSL
YEALFDIDCFPESASDLESGTKRPSSGDDQPSVEALDRLSRARDHLEALESIRDVYPLSE
FVRRFRERTNLEWFLTAEERAELERIDRFVEGYDGDSVLTALTPRFVDALERTLRASESS
GDRGARSSDRIDVMTVHQAKGLQFDTVLAPFLSDEEWCVDGDYARRDRYRLLEATLDDDV
DSPLLANLAADPLGEEWRVLHVALTRAENHLLVFGSEYDYDGDETQLSVSTAESCLADDI
EWSVAGKRMDLWSTVSESFETVREQYPKTVVDWTDALSSTARTNPGTITYYQDYDDRRIE
PLETREAIETVHQLGRLLRNGQLLPAADAASSAGLVDDFDVPMARQASALTTETVRFPVE
TLSTISELEATMRHSYSALATHETCARKHYLDHVVQAPGDSVRPAESDRENLSPDSRRST
RDRADSRLVGSIFHAVAEEAFHRGYDTRGAWHDAASRQLAARDSLEHREAVLACIDRYFE
AEAEAFDAPVADWETVAAELPFVLEDVSGVTGDVVGYVDSVQRTPAGGLVVLDYKATAER
IDPGEAVQLSVYARACEQAFDEPIAGVGYVYVGDVEGSRVELLEPGELPDWSAVRESLAS
IDEPTFVETTPGPHCRYCPHRSLGCGPDGDASAEAEGSPSIEADGGRTGQ
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaccggtcggaaccggcgggaaccggtccgctcgagccgaagggaaaccagcgg
cgggtcatcgagagcgagagcgtgtcgacggccgtcgacgcgggtgccgggaccgggaag
acgacgacgatgctcatgcggatcgagcgggcgatcgacagcggggcggtcgaccccgag
gacgtgctggtactcaccttcgcgaacgaggccgcctcgagcattcgcgaggcggtaaca
gaacggctcgatccggaggccgccgcggccatcgacgtctacacctaccactcgttctgt
tatcagctcgttcgcgagtacgcctactacctcggactctcgccggagttcgaggtcgtg
accgaacgcaagcgacggcggatcgtcggccgactgctcgccgaaaccgagtacgacttc
gcggcggcccccgctcgcggcgacagctcaccggcggacctcgcagacgccatcgacggg
ttcatcgcgacgatgagccaggaggacatcggccccgaaaccctcgagtcgcgactgccg
tcggtccggacactcgagttgtgtaccgagttcgtcctctggctcgaggagaccgcgacc
gaggaactctccttcgacaaggaggcgtttcggtacttcaacgaccccgatcacctcgag
gccgcacgcgagtcgctgatcgagtacggcaagctggtcggcttctgtcgcgagaagatc
gcggaagcgccgagcgagtttcggtcggatccggtcgtcggcacgatcgatcgatacctt
cgggcgctacagacgtgcgtgaccaatacactcgaggaactctcgctcgaggagccgacg
acgaaacacctgccgagagcgctgttcggaaacgagatctggggcgagtcgacgggccga
ctcgagcaaacgccgttcggtcggttgaaacactacgtcgagttcctgcggctcgcccgc
cactataccgacgtctacgcggattatcgggagacgttagcgcgcgacgacgccgtcgac
ttcgacgaactcgttcggacggcgacggggttgctcaccggagccggttccgtcgccgac
gaaatcgcgaaccgctgggaccacgtctactgcgacgagtttcaggacaccgacgagacg
cagtttcgactcattcgggcgctcaccgagggcgaaacccggccggatctactcgcgatc
ggcgacaaggatcaggcgatctacggctggcgaggaaccgaccgcgaggggctcgaccga
ctcgccgacaccgacgacgaacacgagtcgatcgaactcgagttgaacttccggtcgcga
caggagatcctcgatctgacgaaccactgttcgtacgggccccaggagtcgaagacgctg
cgggagaacgaccgaacccccggcgagtacgacgaggcggatccgccccaccgactgctg
aaagtcgagagcgacgaactgccctggtcgacgcccgagcaggtggccagagcgaccgct
cgactgctcaacggccgggtcgagaacgtcccgcggcgctcgctcgaggatatcgcgatc
atcgttcgaacgaaccggcaggcgcaggcggtcgccgacgagctcgagagtcgccggatc
ccctttgccgtctccggctcgccgaggggcaaaatctcgccgggcgtccagaccgtcctc
tcgtatcttcgcgtacttgtcgacccggacgccgatgcccacctccggcgggtgttgctc
tatcggtatcgcattccggaatcggacctcgcggcgctcgcccggcgaggcgactcgttg
tacgaggcgctgttcgatatcgactgtttccccgagtccgcttccgacctcgagagcggt
acgaagcgcccctcatctggcgacgatcagccgtcggtcgaggccctcgacaggctctcg
cgggcccgagatcacctcgaagcgctcgagtcgatccgggacgtctacccgctctcggag
ttcgtccggcgcttccgggaacgaacgaatctcgagtggttcctgaccgccgaggaacgc
gccgaactcgagcgaatcgatcgattcgtcgagggatacgacggcgattcggtactgacg
gcgctcacgccgcggttcgtcgacgcgctcgaacgaaccctccgcgcgagcgagtcctcg
ggcgaccgtggcgctcgctcgagcgaccgtatcgacgtgatgacggtccaccaggcgaag
gggctgcagttcgataccgtcctcgcaccattcctctcggacgaggaatggtgcgtcgac
ggcgattacgctcgccgcgaccggtaccgactcctcgaggcgacgctcgacgacgatgtc
gactcgccgctgctcgcgaacctcgcggccgaccccctcggcgaggagtggcgcgtgctc
cacgtcgcactgactcgagccgagaaccacctcctcgtgttcggctcggagtacgactac
gacggcgacgagacgcagttgtccgtctcgaccgccgagtcctgtctcgccgacgacatc
gagtggtccgtggcgggcaaacggatggacctctggtcgacggtctccgagagcttcgag
accgttcgcgagcagtatccgaagaccgtcgtcgactggacggacgcactttcgtcgaca
gcacgcacgaacccgggaacgatcacgtattaccaggactacgacgaccggcggatcgaa
ccgctcgagacgcgggaggcgatcgagacggtccaccagctcggtcgattgctccgcaac
gggcagttgctcccggccgccgacgccgcgagcagtgccggactcgtcgacgacttcgac
gtaccgatggcgcggcaggcgagtgcgctaacgacggagacggttcggttcccggtcgag
acgctctcgaccatctccgaactcgaggcgacgatgcgtcacagttactccgcgctggcg
acccacgagacctgcgcccgaaagcactacctcgatcacgtcgtgcaggcacccggcgat
tccgttcgaccggccgagagtgaccgcgagaatctgtcgccggactcgcggcggtcaaca
cgggatcgagccgacagccgtctcgtcgggtcgatcttccacgccgtcgccgaggaggcg
ttccaccgcggctacgacacccgtggtgcgtggcacgacgcggccagcagacagctcgca
gcgcgtgattccctcgagcaccgcgaggcggttctggcgtgtatcgatcggtatttcgag
gccgaagccgaggcgttcgacgctcccgtcgccgactgggagaccgtcgcggccgaactg
ccgttcgtcctcgaggacgtctccggagtcactggggatgtcgtcggttacgtcgattcg
gtccagcgaacccccgcgggcgggctggtcgtgctcgattacaaagcgaccgccgaacgg
atcgatccgggcgaggccgtccagctctcggtgtacgctcgagcctgcgagcaggcgttc
gacgaaccgatcgcaggggtcggatacgtctacgtcggcgacgtcgaggggtcgcgggtc
gaactcctcgagccgggggaactgcccgactggtcggcggttcgcgagtcgctcgcgtcc
atcgacgagccgacgttcgtggagacgacgccgggtccccattgccgatattgcccccat
cggtcgctcgggtgtgggcccgacggagacgcgtccgcggaggccgagggctcgccgtcg
atcgaagctgacggcgggcgaactgggcagtga
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