KEGG   Halosimplex litoreum: I7X12_18280
Entry
I7X12_18280       CDS       T06959                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hlt  Halosimplex litoreum
Pathway
hlt03030  DNA replication
hlt03410  Base excision repair
hlt03420  Nucleotide excision repair
hlt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hlt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    I7X12_18280
   03410 Base excision repair
    I7X12_18280
   03420 Nucleotide excision repair
    I7X12_18280
   03430 Mismatch repair
    I7X12_18280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hlt03032]
    I7X12_18280
   03400 DNA repair and recombination proteins [BR:hlt03400]
    I7X12_18280
Enzymes [BR:hlt01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     I7X12_18280
    6.5.1.6  DNA ligase (ATP or NAD+)
     I7X12_18280
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     I7X12_18280
DNA replication proteins [BR:hlt03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    I7X12_18280
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     I7X12_18280
DNA repair and recombination proteins [BR:hlt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     I7X12_18280
   NER (nucleotide excision repair)
    Other NER factors
     I7X12_18280
   MMR (mismatch excision repair)
    Other MMR factors
     I7X12_18280
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DUF5486
Other DBs
NCBI-ProteinID: QPV62649
UniProt: A0A7T3KV02
LinkDB
Position
3682126..3683817
AA seq 563 aa
MELAAFAERARAIEAESADTDVVESVTDLLRVSSQDLPVVARYVQGRVFPAHDSTKLDIG
PALCYEAIAKAAGRNVTADDVEERVADVGDVGEVAASCDFGGQRGLAAFGGGGGAGAEAG
EGGTGGLTVAEVDAELRALAATDGSGSRDTKRDILFGLFNRTGDDEARYLARLVLSEMRI
GVGDGAVRDAIADAFDVPVDAVERALQVTNDHGEVAVVARDEGLGGLESLGLDVGRPVGA
MLAQAGTVTDALDDWERVAVETKFDGARVQVHYDGEETTLFSRNMEDVTDPLPEVVEFVE
DTLDAPAILDGEVVAVADDGSPLPFQEVLRRFRRKHDVAKAREDVTVEFRAFDCLHAAGD
DMLDEPLTRRHDRLADALGDAGARALSELTVSGDSDEIAAIEADALDADHEGIMLKNPES
AYTPGRRGKQWLKRKPDVETLDLVVTGAEWGEGRRAELLGTFEISAATDDGFAALGKVAT
GITDEELEALTALLEPHVLAEDGADVEIDPTVVFEVGYEEIQASPTYGAGYALRFPRFLG
VRDDIDPGDADSLERVERLADRQ
NT seq 1692 nt   +upstreamnt  +downstreamnt
atggagctggccgccttcgccgagcgcgcccgggcgatcgaagccgagagcgccgacacc
gacgtcgtcgaatcggtgaccgacctgctgagggtgtcgagccaggacctgcccgtcgtc
gcccgctacgtccagggccgcgtgttcccggcccacgactcgacgaaactcgacatcggg
ccggcgctctgttacgaggcgatcgcgaaggcggccggccggaacgtcaccgccgacgac
gttgaggagcgcgtcgccgacgtcggcgacgtgggcgaggtagcagcgagctgcgacttc
ggcggccagcgggggctggccgcgttcggtgggggtggcggggcaggcgctgaggccggt
gagggcgggaccggtggactgaccgtcgccgaggtggacgccgagttgcgcgctctcgcc
gcgaccgacgggtcgggtagccgcgacaccaagcgggacatcctgttcgggctgttcaac
cggacgggcgacgacgaggcgcgctatctcgctcggctcgtcctctccgagatgcggatc
ggcgtcggcgacggcgccgttcgagacgcgatcgccgacgcgttcgacgtgccggtcgac
gcggtcgagcgagcgctgcaggtgacaaacgaccacggcgaagtcgcggtggtcgcccgc
gacgagggcctcggcgggctcgaatcgctcgggctcgacgtggggcggccggtcggcgcg
atgctggcccaggccggcaccgtgaccgacgcgctcgacgactgggagcgggtcgccgtc
gagaccaagttcgacggggccagagtacaggttcactacgacggcgaggagacgaccctc
ttctcgcggaacatggaggacgtgaccgacccgctcccggaggtcgtcgagttcgtcgaa
gacaccctcgacgcgcccgcgattctggacggcgaggtcgtggccgtcgccgacgacggc
tcgccgctcccgttccaggaagttctccggcgattccgccggaaacacgacgtcgcgaag
gcccgcgaggacgtcaccgtcgagttccgcgcgttcgactgcctgcacgccgccggcgac
gacatgctggacgagccgctcacccggcgccacgaccgcctggccgacgcgctcggcgat
gccggcgccagggcgctgtcggaactgaccgtctccggagactccgacgagatcgccgca
atcgaggccgacgccctcgatgcggaccacgaggggatcatgctgaaaaaccccgagtcg
gcctacacccccggccggcgcggcaagcagtggctcaagcgcaaacccgacgtggagacg
ctggatctggtcgtgacgggcgccgagtggggcgaaggccggcgggccgaactgctgggg
accttcgagatatcggctgccaccgacgacggcttcgccgcgctcggcaaggtcgcgact
gggatcaccgacgaggaactcgaagccctgacggccctgctcgaaccccacgtcctggcc
gaagacggcgccgatgtcgagatcgatcccacggtcgtcttcgaggtgggctacgaggag
atccaggcgtcaccgacctacggagccggctacgcgctgcggttcccgcggtttctcggc
gtgcgcgacgacatcgacccgggagacgccgactcgctggagcgggtcgaacggctggcc
gaccggcagtag

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