Hyphomicrobium sp. MC1: HYPMC_1815
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Entry
HYPMC_1815 CDS
T01557
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00521
Streptomycin biosynthesis
hmc00523
Polyketide sugar unit biosynthesis
hmc00541
O-Antigen nucleotide sugar biosynthesis
hmc01100
Metabolic pathways
hmc01110
Biosynthesis of secondary metabolites
hmc01250
Biosynthesis of nucleotide sugars
Module
hmc_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HYPMC_1815 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HYPMC_1815 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HYPMC_1815 (rfbC)
Enzymes [BR:
hmc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HYPMC_1815 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CCB65040
UniProt:
F8JAR3
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All DBs
Position
complement(1717559..1718113)
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AA seq
184 aa
AA seq
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MLEVVELSIPGVALIRPGRFNDARGFFVEVYNSKALRDVGIDDVFLQDNMSLSLKAGTVR
GLHFQRPPHTQAKLVRVSKGRIFDVAVDLRPGSATYGQHVSAELSAENGHQVYIPNGFAH
GFCTLETNTEVVYKVSSHYAPGAEGGILWSDPELDIAWPVTTTEAFLSDKDARLPLFNDV
SGEF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgctagaagtagttgagctttctattccaggcgtagctctgattagaccaggacgcttc
aatgacgctaggggctttttcgttgaagtttataattccaaagcattgcgggacgtcggc
atcgacgacgtctttttgcaagacaacatgtcactatccttgaaggcaggtacggtcaga
ggccttcatttccagagaccaccgcacacgcaggcaaagttagtacgggtaagtaagggg
cgaatctttgacgttgcggtcgacctgaggccaggatccgcaacttacggacaacacgtc
tccgctgagttatcggcagaaaatggccatcaagtttatattccgaatggctttgcgcat
ggtttctgcacgctggagacaaataccgaagtggtctacaaggtctcatctcattacgcg
cctggagccgaaggtggcattttatggtctgatcccgagctcgatatcgcctggcccgta
accaccaccgaagcatttctatcggataaggatgcaagactcccgttattcaacgatgtt
tcaggggaattctaa
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