Hyphomicrobium sp. MC1: HYPMC_2344
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Entry
HYPMC_2344 CDS
T01557
Name
(GenBank) ATP-dependent urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
hmc
Hyphomicrobium sp. MC1
Pathway
hmc00220
Arginine biosynthesis
hmc00791
Atrazine degradation
hmc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hmc00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
HYPMC_2344
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
HYPMC_2344
Enzymes [BR:
hmc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
HYPMC_2344
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp
HlyD_D23
GCV_H
ATP-grasp_3
ATPgrasp_Ter
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
CCB65564
UniProt:
F8JGR7
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Position
2217464..2221084
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AA seq
1206 aa
AA seq
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MFRKVLIANRGAIACRIIRTLDRMGIASVAVYSEADRHSMHVMQAGEAVAIGPSPAAESY
LKYDVILDAAKKTGAEAIHPGYGFLSENPDFAEACEKAGIAFIGPKAQHMRAFGLKHKAR
ELALEANVPLAPGSGLIRDVEHAKSEAQRIGYPVMIKSTAGGGGIGLQLVSSADEIAPMF
ERVERLARNNFKDAGIFLEKYVARGRHIEVQIFGDGKGNVVSLGERDCSAQRRNQKVIEE
TPAPNLPEATRTALWDTARRLCQSVNYESAGTVEYLYDAETNEFYFLEVNTRLQVEHGVT
EEVFGVDLVEWMVRQAANELQLPAQTTLSPNGASIQVRLYAEDPGRDFRPSSGRLTEVTW
PPETRIETWVQSGSEVSPFYDPMIAKIIVKGASREDALSRLQTSLDATRIGGLETNLDYL
RQLSRSEVFGTGQMLTRTLQTFVYNGETIEVLSPGTQTTIQDWPGRVGYWAVGVPPSGPM
DPLSHRLINRLLGNDESAATIETTLSGPTLRFNTDTTVCLGGAELAATLDGEPVAYWQPF
AVKAGQVLKVGGVKGPGVRAYIGVRSGIDVPSYLGSKSTFTLGKFGGHGGRVLMTGDVLH
VGTEANQAPVPGLSADLQPPLTHTWEIGVLYGPHGAPDFFAPEYIDTFFTADWEVHYNSN
PTGIRLIGPKPVWARTDGGEAGLHPSNIHDNAYAIGAVDFTGDMPVILGPDGPSLGGFVC
PVTIVQAELWKMGQLRPGDKVRFVRLTPAAAAARLAKQAAEVASLKSIAAPSFPNGKWGA
DDCVIGSREASGDNPRVVYRRAGDAYMLVEYGPIILDFTLRFRAHALMTALERRKLAGIL
DLTPGIRSLQIHYDGTTLPLEDLLAELSAIEDTLGDLSDVEVPSRIVHLPLSWNDPAVQK
TIDKYMQGVRPDAPWCPSNIEFIRRINGLDSIEDVLRIIFDATYVVLGLGDVYLGAPVAT
PFDPRHRLVTTKYNPARTWTPDNVVGIGGAYMCIYGMEGPGGYQLFGRTCQVWNTYRTTN
AFEAGSPWLLRFFDQIRFYPVSGEELLAFRDRFLEGQVDVKIEPSTFSLKDYQAFAAENA
ETIAAFKARQQAAFEAERARWQQSDQEGAASSADTFEDHDADAALPPGATAVESPVPGSV
WKVLVEPGTTVSEGETLIIVESMKMEMAVPAPTSGVVHEVRCAEGRPVSLGQTLVILKEL
QAEATA
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggaaagttctgatcgccaatcgcggcgcgattgcctgccgcatcatccgtacg
ctcgaccggatgggcatcgcgagtgtcgccgtctattcggaagcggatcgtcattcgatg
cacgtcatgcaagcgggagaggccgtcgccatcggcccctcgcctgcggccgaaagctat
ctgaagtatgacgtcattctcgatgccgcgaagaagacgggcgccgaggccatccatccg
ggctacggcttcttgtcggaaaatcccgactttgcggaagcctgcgaaaaagccggcatc
gcattcatcggtccgaaggcgcagcacatgcgcgccttcggcctgaagcacaaagcgcgc
gagctggcgctcgaagcgaacgtgccgctggcaccgggctcagggcttattcgcgatgtc
gagcatgcgaaaagcgaagcccagcgcatcggctatccggtgatgatcaagagcacggcg
ggcggcggtggcatcggcttgcagctcgtctcgtccgccgacgagattgcgccgatgttt
gagcgcgtcgagcgtctcgctcgtaacaacttcaaggacgctggcatcttcctggagaag
tatgtggcgcgcgggcggcacatcgaagtgcagatcttcggcgatggcaagggtaacgtc
gtctcgctcggcgagcgcgattgctcggcacaacggcgcaatcagaaagtcatcgaagag
acgcctgctcccaacctgccggaggcaacgcgcacggcgctttgggacacggcgcggcgt
ctgtgccagtcggtgaattacgaaagcgccggaacggtcgaatatctctacgacgctgag
acaaacgaattctattttctagaagtcaacacgcggcttcaggtcgagcatggcgtgacc
gaagaagtcttcggcgtcgatctcgtggagtggatggtgcggcaagcggcgaacgagttg
cagcttccggcgcaaacgacgctttctccaaatggtgcgtcgattcaggttcgcctttat
gccgaagatcctggccgcgatttccgtccgagttcgggccgtctgacggaggtcacctgg
ccgcctgagacacgcatcgaaacgtgggtgcagagcggatcagaagtctctccgttttac
gatccgatgatcgccaagatcatcgtcaagggcgcatcgcgcgaagacgcgctatctcga
ttacagacttcgctcgatgcgacgcgcatcggcgggcttgaaaccaacctcgattatctg
cgtcagctgtcgcgctcggaggtgttcggcaccggtcagatgctgacgcgcacgctgcag
acattcgtctacaatggggagacgatcgaggttctctcccccggcactcagacgacgatc
caggattggccgggacgcgtcggctattgggccgttggcgtaccgccttcggggccgatg
gacccgctgtcgcatcgtctcatcaatcgcctgctcggcaacgatgagagcgcggcgacg
atcgagaccacgctttccggcccgacgctgcgcttcaataccgatacgaccgtttgcctg
ggcggcgccgagctggccgcaacgctcgatggcgagccggtagcttattggcagccgttc
gccgtcaaggctgggcaagttctgaaagtcggcggcgttaaaggtcctggcgtgcgcgct
tatatcggcgttcgcagcggcatcgatgttccgagctatcttggcagcaaatcgacattc
acgctaggcaaattcggtggccacggcggccgcgtgctgatgaccggggacgtgctgcat
gtcggcacggaggcgaaccaagcgccggtgcccggcctttctgctgacctccagccgccg
ctgacccatacctgggagatcggcgttctctatggaccgcacggcgcgccggacttcttc
gcgccggagtacatcgacacgtttttcacggcagattgggaagtccattacaattccaat
ccgaccggcattcgcctgatcggaccaaagcccgtgtgggcgcggaccgacggcggcgaa
gcgggactgcatccgagcaacattcacgacaatgcctacgccatcggtgcggtcgacttt
acgggcgacatgccagtgatcctcggccccgacggtccgtcactcggcggtttcgtctgt
ccagtgacgatcgtgcaggcggaactttggaagatggggcaattgcgccctggcgataaa
gtccgcttcgtgcgattgacgcccgcagccgcggcagctcggctggcaaagcaagcggcg
gaagtcgcgtcgctgaagtcgatcgccgcgccctcgtttccgaacgggaagtggggcgcc
gacgattgcgtgatcggtagccgtgaagcgtcgggcgacaacccgcgcgtcgtctatcgc
cgtgccggcgacgcctacatgctcgtcgaatacgggccgatcattctcgacttcacgctg
cggttccgcgcacacgctctgatgacggcgctcgaacggcgcaagcttgccggcattctc
gatctgactcccggcatccgttcgctgcagatccattacgacggtacgacgttgccgctg
gaagatttgctggcggagctctcggccatcgaagacacgcttggcgatctgagcgatgtc
gaggtgccgtcgcgcatcgttcatctgccgctgtcttggaatgacccggcggtgcagaag
acaattgataagtacatgcagggcgttcggccggatgcgccgtggtgcccgtcgaacatc
gagttcatccggcggatcaacggcctcgattccatcgaagatgttcttcgcatcatcttc
gacgcgacgtatgtcgtgctcggccttggcgacgtctatctcggcgcgccggtggcgacg
ccgttcgatccgcgccatcgcctcgtgaccacgaagtacaatccggcccggacgtggacg
ccggacaacgtcgtcggcatcggcggcgcgtacatgtgtatctacggcatggagggaccg
ggcggctatcagctcttcgggcggacgtgccaagtctggaatacctaccggacgacgaat
gctttcgaggccggttcgccgtggctgttgcgcttcttcgaccagattcggttctatcca
gtttccggcgaagagcttctggccttccgcgacaggtttctcgaaggtcaagtggacgtc
aaaatcgaaccttcgacgttcagcctgaaggactatcaggcgttcgccgccgaaaacgcc
gagacgattgcggctttcaaagcgcggcagcaggcggctttcgaagcggagcgggcgcgc
tggcaacagagcgaccaggaaggggcggctagctcggccgacaccttcgaggaccatgac
gccgatgccgcgttgccgccgggggcgactgcggtagaaagtcctgtgccggggagtgtc
tggaaagtccttgtcgaaccgggaaccacggtttccgaaggcgagacattgattatcgtc
gagtcgatgaagatggaaatggccgttcctgcgccgaccagcggcgtcgttcatgaggtt
cgatgcgccgaaggtcggccggtttcgctcggacagacactcgtcatcttgaaagaattg
caggcggaggcgacggcgtga
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