Halomonas meridiana: CTT34_12180
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Entry
CTT34_12180 CDS
T06424
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
hmd
Halomonas meridiana
Pathway
hmd00521
Streptomycin biosynthesis
hmd00523
Polyketide sugar unit biosynthesis
hmd00541
O-Antigen nucleotide sugar biosynthesis
hmd01100
Metabolic pathways
hmd01110
Biosynthesis of secondary metabolites
hmd01250
Biosynthesis of nucleotide sugars
Module
hmd_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hmd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CTT34_12180 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CTT34_12180 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CTT34_12180 (rfbC)
Enzymes [BR:
hmd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CTT34_12180 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Alpha_kinase
Motif
Other DBs
NCBI-ProteinID:
QHD50389
UniProt:
A0A857GM92
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All DBs
Position
complement(2529436..2529993)
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AA seq
185 aa
AA seq
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MQYEKLAIPDVMLLTPQVFSDERGFFMETFRHADFIKHCGNYTFVQDNHSLSCCGILRGL
HYQFEKPQGKLVRVTRGEVFDVAVDLRLNSPTFGKWIGVFLNSTSKQLLWIPPGFAHAFY
VTSNEAEFQYKCTDYYNPGDEYCIRWDDEDLAIDWPLVHENMPILSGKDNAGSSFKDARK
FELIR
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatgaaaaacttgctatacccgacgtaatgcttcttactccgcaagtatttagt
gatgagcgtggtttttttatggagacttttcgtcatgcagattttataaaacattgtggc
aattacacatttgtacaagataatcatagtctttcttgctgcggtattttgcgagggctg
cactatcagtttgaaaagcctcaagggaaattagttagagtgactcggggagaagtcttt
gatgttgcggtggatttaagattaaacagtcctacatttggtaaatggataggtgttttc
ttaaactctacaagtaagcaactgctttggataccgccaggattcgcccatgcgttttat
gttactagtaatgaagctgagtttcagtataaatgcacagactattacaacccgggcgat
gaatactgcatccgttgggatgatgaggatttagctatagattggccccttgtacatgaa
aatatgcccattctatcagggaaagataatgcaggatcaagcttcaaagatgctcgaaaa
tttgaattaatacgatag
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