Haloferax mediterranei: HFX_0628
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Entry
HFX_0628 CDS
T02129
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hme
Haloferax mediterranei
Brite
KEGG Orthology (KO) [BR:
hme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hme03016
]
HFX_0628
Enzymes [BR:
hme01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HFX_0628
Transfer RNA biogenesis [BR:
hme03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HFX_0628
Prokaryotic type
HFX_0628
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF2201_N
Motif
Other DBs
NCBI-ProteinID:
AFK18352
UniProt:
I3R292
LinkDB
All DBs
Position
complement(591297..592655)
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AA seq
452 aa
AA seq
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MREAHSLERAVGIDHYVSDADGVGGVLRVKPEDFRVRELELDSLNIRPPDAPTGDFPNLV
VRATLRGWDTNDFAGRLSDELGVSRERVSWAGTKDKHAVTTQLFTVHGGDADNVPEIPNA
DIEVVGRLGRTLDFGDLAGNGFRIRVRDPERPENTAAITDSLREFSGRDDVVGVPNFFGH
QRFGSIRPITHTVGLHVIRGEWREAVLAYCGGPTEDEPEETQEGRAVVNEEAESADPDWH
RALDRIPGYLGYERGMLHRLAEDGAETDADWRNALESVPSNLQRLFVNAAQSYAFNRMLS
ERLDRGLPFDEPVEGDVVCFADRDAPDGLELPDVSRLQSATGRRVDVMARHIERGRAFVT
APLVGTETELAEGEQGDIERAVLDDLDLEPGDFDLPGNFQSTGTRRAILVRTDLGIDEGD
EDDGVVFDFALPHGSYATAVMREYLKAGPLDL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaagcacactcgctcgaacgcgccgtcggcatcgaccactacgtgagcgatgcg
gacggcgtcggcggcgtcctccgggtcaaacccgaggacttccgcgtccgcgaactcgaa
ctcgactcgctgaacatccgcccgccggacgcgccgacgggagacttccccaacctcgtc
gtccgcgccacccttcgcgggtgggacacgaacgacttcgccggtcgtctctccgacgaa
ctcggcgtgagcagagagcgcgtctcgtgggccggaacgaaggacaaacacgccgtgacg
acccagttgttcacggtccacggcggtgacgccgataacgtccccgagattccgaacgcc
gacatcgaagtcgtcggtcgactcggtcgaaccctcgacttcggcgacctcgcgggcaac
ggcttccgtatccgtgtccgcgacccagaaagaccggaaaacaccgcggccatcaccgac
tcgctccgcgagttcagcggccgagacgacgtggtcggcgtccccaacttcttcggccac
cagcgcttcggcagcatccgacccatcacgcacacagtcggtcttcacgtcatccgcggc
gagtggcgcgaggcggtcctcgcgtactgcggcggcccgacagaggacgaacccgaagag
acacaggagggccgcgcagtcgtcaacgaggaagccgaatccgccgaccccgactggcac
cgtgcactcgaccggattccgggctacctcggctacgagcgtgggatgctccaccgcctc
gccgaagacggtgcggagaccgacgcagactggcgcaatgcgctcgaatcagttccctcg
aatctccagcgactcttcgtcaacgccgcgcagtcctacgcgttcaaccgaatgctctcc
gagcgcctcgaccgcggtctcccgttcgacgaacccgtcgagggcgacgtggtctgtttc
gccgaccgcgacgcacccgacggtctggaactccccgacgtgagccgtctccagtcggcg
accggccgccgagtcgacgtgatggcccgtcacatcgagcgcggccgcgccttcgtcacc
gcaccactcgtcggcaccgagacggaactcgccgagggagaacagggagacatcgaacgg
gccgtcctcgacgatctggacctcgaaccgggggatttcgacctccccggaaacttccag
tcgaccgggacgcggcgagcgattctcgtccgcactgacctcggaatcgacgagggtgac
gaagacgacggcgtcgtgttcgacttcgcgctcccgcacgggtcgtacgcgaccgccgtg
atgcgcgagtatctaaaggctggcccgctggacctctaa
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