Hydra vulgaris (swiftwater hydra): 100198779
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Entry
100198779 CDS
T01080
Symbol
LOC100198779
Name
(RefSeq) leucine-rich repeat protein soc-2 homolog
KO
K19613
leucine-rich repeat protein SHOC2
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Pathway
hmg04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
100198779 (LOC100198779)
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GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
LRR_9
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
100198779
NCBI-ProteinID:
XP_047124382
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All DBs
Position
15:16117425..16160046
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AA seq
607 aa
AA seq
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MVRRKRFGLYEIEEIWKMSKNYSNTQITEEEESKLLEKKLKSLKVEDEDDDAFLPSTHTV
KDVSNSHITGAFIDTKDKSDHSRHVRIDVKDDGIKKTKRKSTKGDKESSSIVKGLMKCKE
ESSKMLNLSKLGIVNMPKEIKELTGLTQLFLYGNKISKLPPEIGLLMNLETLLLNENSIS
SLPAEIVNCKKLQMLDLRHNKIKEIPPVLYSLVSLKQLLLRFNRLTTVEPEIGNLTHLTM
LSLRENRLKHIPDTIGNLKSLVTLDLAKNHLESLPPEIGKCIEMNTLDLAHNELRDLPDS
IGKLTALSRLGLRYNQLTSLPSSICQCTLLQEINIESNGISSLPSGLLLSSKLCDSITLS
RNEFENFPSDGPKQFASVTSLVFDHNKIKKIPFGIFSKAQFLTKLNLKDNLIAELPLDFG
TWANLDELNLGTNQLTVLPDDIKWLVNLEVLILSNNQLKRIPRSIGNLRKLRVLDLDENN
LECLPNEIEYLKSLEKLLLQSNKLATLPATIGHLKKLSYLSVGENDLTVLPPEIGALESL
EQLFLNDNKNLHALPHTLVLCQNLTIMNIDACPLSSLPQEIVANGPSVVIQYLRFEGPYN
GNNTLPT
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggagaaaaagatttggtctgtatgaaatagaagaaatctggaagatgtcaaaa
aattattcgaatactcaaattacagaagaagaagagtctaaattacttgaaaaaaaatta
aagtcattaaaagtagaagatgaagatgatgatgcattcttaccttctactcatacggtg
aaagatgtatccaacagtcatattacaggagcatttattgatacaaaagataagtctgat
catagcaggcatgtaagaattgatgtaaaagatgatggtattaagaagactaaaagaaaa
tctaccaaaggtgataaagaatctagttctattgttaaagggcttatgaagtgcaaagag
gaaagcagtaaaatgctaaatttatctaagttagggattgtcaatatgccaaaagaaata
aaagagttaactggtttgactcagttgtttctatatgggaataaaataagtaaactacca
ccagagatcggtcttcttatgaatttggaaacattgctccttaatgagaacagcatttca
tctttaccagctgaaattgtaaattgtaaaaaacttcaaatgttggatttacgtcataac
aaaattaaagagattccccctgttttatacagcttagtttctttaaaacagttacttctt
cgatttaacaggcttacgacagttgaacccgaaattggaaacctaactcatttgacaatg
ttaagtttgcgtgaaaatcgccttaagcatataccagataccattggcaatttaaaaagc
ttagtaacattggatttggcaaaaaatcacttagagtctttaccaccagaaattggtaaa
tgcatagaaatgaacactttggatctcgctcacaatgagttgcgagatcttcccgattct
ataggaaaactaactgcattatcaaggcttggtttaagatataatcagttgacttcatta
cccagcagtatttgtcaatgtactttacttcaagaaattaatatcgaatctaatggcatc
tcaagtttaccgagtggattgcttttgtcatcaaagttatgtgattcaattacattatca
agaaatgaatttgagaattttccaagtgatgggccaaaacagtttgcttctgttacctca
ctggtgtttgatcacaataaaattaaaaaaattccatttggcatcttttcaaaagctcag
ttcttaacaaagttgaatttgaaagataatttaattgctgaacttccgcttgattttggt
acatgggctaacttggatgaattaaatttaggaacaaatcagttaacagttctaccagat
gatataaagtggttggtaaacttagaagttcttattttgagtaacaatcaacttaagagg
attcctcgatctattgggaatcttcgcaagctaagggtattagatcttgatgaaaataat
ttggaatgtcttccaaatgaaattgagtatttaaaatcccttgagaagctgttgctgcaa
tctaacaaacttgctaccttaccagctactattggacatttaaaaaaactttcatactta
agtgttggtgagaatgatctgacagtacttccaccagaaataggagctctggaatcacta
gagcaactttttctcaacgataataaaaacttgcacgcacttcctcatacacttgtactt
tgtcaaaatttgactattatgaatattgatgcttgtccattatcatcacttcctcaagaa
attgttgctaacggaccttcggttgtgattcaatatttgcgctttgaaggaccttacaat
ggaaacaacaccttacctacatga
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