Hydra vulgaris (swiftwater hydra): 100212430
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Entry
100212430 CDS
T01080
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hmg03009
]
100212430
03036 Chromosome and associated proteins [BR:
hmg03036
]
100212430
Enzymes [BR:
hmg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100212430
Ribosome biogenesis [BR:
hmg03009
]
Eukaryotic type
Pre-60S particles
Helicases
100212430
Chromosome and associated proteins [BR:
hmg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
100212430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
ERCC3_RAD25_C
CMS1
AAA_30
Motif
Other DBs
NCBI-GeneID:
100212430
NCBI-ProteinID:
XP_047145195
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All DBs
Position
12:34781573..34841143
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AA seq
635 aa
AA seq
DB search
MVELEKKTKLKKSKKNLEDLGNVVRRRPRTRSMSEVDDTIDDKPKLEEDPGDFSNFKISK
KTVKKLIANGVNKLFPVQYTTYNAILDGSDVIVQARTGTGKTLGFALPVLEKLKNIDSEQ
KRKSPLVLTLAPTRELAIQICKEVEKYKPRQMTISCFYGGAPYDKQEQELRNGIDFLVGT
PGRILDHINKGRLDVSKLQYVILDEADRMMDMGFQESMEEILSYAYTEDNKPQTLLFSAT
VPAWLQKNSEKYLTKNLKKFDLIGRDKNKGATTVEHKAIKCTYWDRPSTIKDIIQQYSGK
FGKTIIFTSTKQEANELALNSVINMDSQVLHGDIQQKQRELTLQSFRNGKFNCLIATDVA
ARGLDIPEVDLVIQTEPPKDVDSYIHRAGRTGRAGRKGVCIIFYKPGQEYGVAAVEHKAG
ISFTRIGAPQQKDLIAASAEDAVRSLDEVKEDVISYFLDCARDLIEKRGAEKALAAALAY
ISGTTEIVNRSMLTSQPGYTTYLMKQNLELRSTGLIWHTLRRYFDQTFIDSIKGMRICKD
KLGCVFDVPTESIKVIEECWKGDKFSTLEPITELPELMEGVQGFQNNTGAGYRGSNSGSW
NNGNNRGGNGGFGNKRTFSQSNSYNNSSNKRPRNF
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggttgaactagaaaaaaaaactaaactaaaaaaatcaaagaaaaatttagaagatttg
ggtaatgtggtcagaagaagaccgagaacaaggtcaatgtcagaagttgatgacacgatt
gatgataagccaaagttagaagaagatcctggagattttagcaactttaaaatatcaaag
aaaactgttaaaaagttaattgcaaatggtgtcaataaactatttcctgttcagtataca
acatataatgctatacttgatggttcagatgtgattgttcaagccagaactggcactggc
aaaacacttgggtttgctctaccagttttggaaaaattaaaaaatatagatagtgaacaa
aaacgtaaaagtcccctggtgctaactcttgccccaacaagagaacttgcaatacaaatc
tgcaaagaagttgaaaagtataaaccacgccagatgacaatttcatgtttttatggtggt
gcaccgtatgacaaacaagaacaagaattgagaaatggtattgactttttagttggaacc
cctggaagaatattagatcacataaacaaaggaagattagatgtctctaaattacaatat
gtaatacttgatgaagctgaccgtatgatggatatgggttttcaagaatcaatggaggaa
atactgtcatatgcttacactgaagataataaaccacaaacattactattttctgctaca
gttccagcatggctacagaaaaattcagagaaatatttaacaaaaaatcttaagaaattt
gatttaattggtcgcgataaaaacaaaggggctactactgtggaacacaaagcaataaaa
tgcacatactgggatagaccatctacaattaaggacattatacagcaatatagtggaaag
tttggaaaaacaataatttttacatcaacaaagcaagaagcaaacgaactggcattgaac
tctgtaataaatatggattctcaagttttgcatggagatattcaacaaaaacagagagag
cttactcttcagagttttagaaatggaaagtttaactgtctcattgctacagatgttgct
gctcgtgggcttgatatacctgaagttgacttggttattcaaacagaacctccaaaagat
gttgactcttacatccatagagctggaagaactggacgtgctggtcgtaaaggtgtttgc
attatattttacaaacctggtcaagaatatggagttgctgctgttgaacacaaagctggt
atttcgttcacaagaattggcgcacctcaacaaaaagatttgattgctgcttcggctgaa
gatgctgttagatctttagatgaagtaaaagaagatgtcataagctactttcttgattgt
gctagagaccttattgaaaaaaggggagcagagaaagctcttgctgctgcattagcttat
atttctggaacaacagaaatagtcaatagatctatgttaacgtctcaacctggttatact
acatatctcatgaaacaaaacttggaacttcgaagcactggattaatatggcacacgtta
aggcgttattttgatcaaacatttattgacagtataaaaggaatgagaatatgcaaagac
aaacttggttgcgtttttgatgttccgacagaaagcattaaagtgatagaggaatgttgg
aaaggagataagttttcaactcttgaaccaattacagaacttccagaattaatggaaggt
gtgcaaggatttcaaaataatactggagctggatacagaggttcgaattcaggtagctgg
aacaatggtaataatagaggaggcaatggaggatttggaaataaaagaacatttagtcag
tcaaacagttataataatagtagcaataaaagaccaagaaatttttaa
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