Hydra vulgaris (swiftwater hydra): 100213744
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Entry
100213744 CDS
T01080
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hmg03019
]
100213744
04121 Ubiquitin system [BR:
hmg04121
]
100213744
Enzymes [BR:
hmg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100213744
Messenger RNA biogenesis [BR:
hmg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100213744
Ubiquitin system [BR:
hmg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100213744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
DUF3583
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_2
SBBP
zf-RING_2
zf-C3HC4_4
Invasin_D3
TolB_like
zf-RING_5
Big_1
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
100213744
NCBI-ProteinID:
XP_002166121
UniProt:
A0A8B6XPK0
LinkDB
All DBs
Position
6:27216738..27233857
Genome browser
AA seq
746 aa
AA seq
DB search
MTTLKTARDIYDFRCILCSETFKNPKVLPCLHSFCYSCLEELIRGHEQTLVCPTCTVEIQ
VDPTGLDAFPANSFAINMLNILAIENPTNCSNCEDRELANSRCLDCVENLCTRCVTAHER
IRQTKGHKIITFEELQNNAVHDALKCHSFCKTHDREILKYFCETCDEAICRDCAISEHRD
HNYMDLKEAVKLHRNGVTNLLDNAKRKIPVIKLALKEIAEVKENLNQRRTSIAHFIKSKI
DLLIKYMEERKTQLLSQLDEIYLEKESVINDQQDELELDLDNFHSSCEFVENMMNYGNEA
EVMTVKRFMTKRLRDLCSYQPQTEPEENDVIEFSFEDAPLKDEVDKFGKLSTSNTFPLFC
IAKGDGLHQATMGHTTEFKVITKDRFGNFIPRGGDALSVKITDSKGTTTNAEVLDYNNGT
YSVTYKVKSKGKHLVAVYIRDKAIQNSPFEVNVSSGVDIEKIGPMLTKFGSGGVTSSLAK
DDSYEPWGLVCNKDGDIIVTDHSNHKVQVFDVNGKLLHQFGVRGKDDGEIWYPTGIAVDK
YSNIYVADHGNHRIQAYTGDGKFIRKYGSRGTGDGQLKGPCGICIDRENRLIVTDRDNHR
VQIFDLDGKFLLAFGGYGIQDGKMNSPRHVSVTMENNIVISDTNNYRVQIFDRNGKFISK
FGSKGTLEAQFMCPSGIGLDGENNIVIADFRNANVQIFNEEGNLLKVLGSEGSISAGIFS
KPTGLFVSSSGNILVADRGTHKIYLF
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgacaacattaaaaactgctcgggatatttatgactttcgttgcatattatgttctgaa
acatttaagaatccaaaagttcttccttgtttgcattccttttgttactcgtgtttggaa
gagctcattcgagggcacgaacaaacattggtatgtccaacatgtactgttgaaattcaa
gttgatcctactggactagatgcatttcctgctaattcttttgccatcaacatgcttaac
attcttgccatagaaaatccaaccaattgctcaaattgtgaagatcgtgaattagcaaat
tcaaggtgtttagattgcgtggaaaatctatgtacaagatgcgtcactgcacatgaacgt
attagacaaacaaaggggcataaaataattacatttgaggaactgcaaaacaatgcagtt
catgatgcactcaagtgtcattccttttgtaaaactcacgatagagagatactaaaatac
ttttgtgaaacgtgcgatgaagcaatatgtagagattgtgcaataagtgaacacagagat
cacaattatatggatcttaaagaagcagttaaactccacagaaacggggtaactaatcta
ttggacaatgccaaacgaaaaattcccgttataaaacttgccttaaaagaaatagcagaa
gttaaagaaaacttaaatcaaagacgcacctcaattgcacattttataaaaagcaagatt
gatcttctaataaaatacatggaagaaagaaaaacacaacttctttctcagctcgatgaa
atctacttggaaaaagaatcggtaataaatgatcaacaagatgagttggaactcgacctc
gataattttcattcaagttgtgaatttgtagaaaatatgatgaactatggaaacgaagct
gaagtaatgactgtaaaaaggtttatgacaaagagattgcgtgatttatgtagttatcaa
cctcaaacagaacccgaagaaaacgatgttattgaattttcttttgaagacgcacctcta
aaggatgaagttgataagttcggaaaacttagcacaagtaatacatttcctttattttgc
attgcaaaaggtgatggtcttcaccaggctacaatgggacatacaacagaattcaaagta
attacaaaagacagatttggaaattttatacctagaggaggagatgctttgagtgtaaaa
ataactgattccaagggaactacgacaaatgcagaagttcttgattataataatggaaca
tattctgttacctacaaagtaaaatcaaaaggaaaacatttagtagctgtttatatacgc
gacaaagctattcaaaacagtccgtttgaagtaaatgtttcctcaggagtagatatagaa
aaaattggaccaatgctaacaaaatttggttcaggaggtgtcacaagttctcttgcaaaa
gatgacagctatgaaccatggggcttggtttgtaataaagatggtgatatcatagttact
gaccatagtaatcataaagttcaagtttttgatgtaaacgggaaactacttcatcaattt
ggtgtaagaggaaaagacgatggagaaatatggtaccctactggaatagccgtagataaa
tatagcaacatttatgtagcagatcatgggaatcatagaattcaagcatatactggagat
ggaaaatttattaggaagtacggctcacgtggaacaggagatggacaattaaaaggtcct
tgtggaatatgtattgatcgggaaaataggctcatagttaccgacagagacaaccatcgt
gttcaaatatttgatcttgatggaaagtttttacttgcatttggtggttacggaatccaa
gatggaaaaatgaattctccccgacacgtttctgtaaccatggaaaacaatattgtaata
tctgatacaaataactatcgggttcaaatatttgatagaaatggaaaatttatttcaaag
tttggctcaaaaggaacacttgaagctcaatttatgtgtccatctggaattggattagat
ggcgaaaataatattgtcattgctgactttagaaacgccaacgtgcaaatttttaacgaa
gaaggaaaccttcttaaagtacttggttcagaaggaagtatttctgcaggcatattttca
aagccaactggtttatttgtgtcgtctagtggaaatattcttgtggcagataggggaact
cacaaaatttatttattttaa
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