Hydra vulgaris (swiftwater hydra): 101235581
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Entry
101235581 CDS
T01080
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
hmg
Hydra vulgaris (swiftwater hydra)
Brite
KEGG Orthology (KO) [BR:
hmg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hmg01002
]
101235581
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hmg04121
]
101235581
Enzymes [BR:
hmg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101235581
Peptidases and inhibitors [BR:
hmg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101235581
Ubiquitin system [BR:
hmg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101235581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP47_C
UCH_1
ubiquitin
PB1
Motif
Other DBs
NCBI-GeneID:
101235581
NCBI-ProteinID:
XP_012555488
UniProt:
A0A8B7DBU2
LinkDB
All DBs
Position
2:29316924..29403091
Genome browser
AA seq
1104 aa
AA seq
DB search
MIELQMIEENSRNQKMFSCIFCCEFKEFSKVSMDVDGNTQINEFYKMVAFKHKLENGTFQ
ISYLTENIEKILIEDCTDTISYFLSDNNKAYEFFIKSKDGSYPLKTKKTTDAVEKNGKAK
SDQFGSLYNSSNSLKSDTGFVGLINQAMTCYLNSLLQTLFMTPEFRNALYKCNYEGLIAN
SVANIPFQLQKLFLQLETSHKRAVETTELTKSFGWDSNEAWQQHDVQELCRVLFDALEES
LKGTEQKDLIKELYQGELEDYVKCQKCDHKNLRKDFYLDISVDMKPFGSDKSYESLEEAL
KAFVKPEVLNGNNQYYCEHCKSKQDAHKGLKFVSFPYLLTIQLKRFTFNFKTLQRMKIHD
RMTFPFQLDLSELLKSTEEDNFDLKKKEEINDLSMKSSLKENETLNGCQAKENERVNGFQ
AEVNEKSFNHLNNEISDSQFLCEKERLNHIQIEDTCSKNELTYELFSVLIHSGSTLGGHY
YAYIKSFKNKKWYCFNDQYVSEISESEIEKSYGGDNKHGGYYSSSSNAYMLMYRKIDKKN
KTFMKKQDWPVYLRKLCSSLHSDINKVDAEKFFCKIKLYGFHPINGNKVEALLEVFKDET
LKNVTEKAWKILNFHEYLPLCQCRLIKYDDNFNSIVMSFDEQETSMVKLLGGFSKIFSFD
LLLEWRKESEQFQVYEPGGVTLKVYVDDKLGDFFEEPFLLYVSSNSTIGELKNIISLRRG
CEFSKLVVYKEHRGFLLLDNPEKTLKMESFYKYDMIFVTDTFTEDYKTSSFYKKLEEFTD
TIKLFIVQTKKENSEELTLNINKKKTFGYLKKKIEDLINVEQHLFRIYRISFDQEYECIR
LEDTLSTMNNGAKIIVKLGRALMTGESRVKVYLFEPNNEDPMTFFMEAVAYKGLTIGEFK
KQIFLELNRVGKDHPIERIRVRRKASKNPCRIYTNNDRFEVEVKLTDLLVELLQENDIIV
NDDYLNLYAKRWRPSQLLLCPFEEIILYKDTSLVNLKKKLSEKSGIPLNQVSIAKGRGVF
PCMVSILDIYNELEWDCNCQKLGEYPISITDDGSVIYYRDNKEEIKELTFDERREIRLSE
RKQYHPFQHSKEKSLKIYANGVKN
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgattgagttacaaatgatagaggaaaattctagaaatcaaaaaatgttttcatgcatt
ttttgttgtgagttcaaagaattctctaaagtcagtatggatgtagatggaaatactcaa
attaatgaattttacaaaatggttgcttttaaacacaaacttgaaaatggaacatttcaa
atttcttacttgacagaaaatatagagaaaatcttgattgaggattgcacagatactata
agctattttctaagcgataataacaaagcatatgaattctttataaaaagcaaagatggg
tcgtatcctttaaaaacaaaaaaaacaacagatgcagttgaaaaaaatggaaaagcaaag
agtgatcagtttggctctttatacaattcttctaactctttaaaatcagatacaggattt
gttggtctcattaatcaagcgatgacatgttacttaaatagtcttttgcagacccttttt
atgactccggagtttcgaaatgctttatataaatgcaattatgaaggtcttattgctaat
tcagttgcaaacattccatttcaactccaaaaactctttcttcaattagagacaagtcac
aaaagagctgtagaaactactgagttgaccaaaagttttgggtgggacagtaatgaagcc
tggcaacagcatgatgttcaagagctttgtagggtgctatttgatgcattagaagagagt
ttaaaaggtactgagcagaaagatctgatcaaagagctttatcaaggagaacttgaagat
tatgttaaatgccaaaagtgtgatcataaaaatttacgcaaagatttttatttggatatt
tcagttgatatgaaaccttttggttctgataaatcttatgagtccctggaagaagcgtta
aaagcatttgtgaagccagaagttttaaatggcaacaatcagtattattgtgaacactgt
aaatcgaagcaggacgcacataaaggcttaaagtttgtgagctttccgtatcttttaaca
attcaactaaagagattcacttttaatttcaaaactcttcaaagaatgaagatacatgac
agaatgacatttccgtttcaattagatttgagtgaacttttaaaatcgactgaggaagat
aattttgatttaaaaaaaaaagaagaaatcaatgatctttcaatgaaaagttctcttaaa
gaaaatgaaacattaaatgggtgtcaggcaaaagaaaatgaaagagttaatggatttcag
gcagaagtaaatgagaaaagttttaatcatcttaacaatgaaatttcagatagccaattt
ttatgcgaaaaagagagattaaatcatattcaaatagaggatacttgctcaaaaaatgag
ttgacatatgagctgttttcagttttgatacattcgggaagtacacttggtggtcattac
tatgcatacattaagtcttttaaaaacaaaaaatggtattgttttaatgatcaatatgta
tctgagatttctgagagtgaaattgaaaagtcctatggcggagataacaagcacggagga
tattattcaagttcatcgaatgcttatatgttgatgtacagaaagattgataagaaaaat
aaaacttttatgaaaaagcaagactggccagtttatttgcgtaaattatgttcctctctt
cattcagatatcaacaaagttgatgccgaaaaatttttttgcaagatcaagctttatggt
tttcatcctataaatggtaacaaagtagaagctttacttgaagtttttaaagatgaaaca
cttaaaaatgttactgaaaaagcttggaagatcttaaatttccatgagtatttgccatta
tgccaatgtcgtctaataaagtacgatgataacttcaattcaatagtaatgtcatttgat
gagcaggaaacatccatggtcaagttattaggtggttttagcaaaatcttctcctttgat
ttacttctagagtggagaaaagaaagcgaacaatttcaagtttatgaaccaggaggggtt
actttgaaagtttatgttgatgacaaattaggagatttttttgaagaaccatttttattg
tacgtgtcatccaactctaccataggggagctcaaaaatataatatcgttacggagaggt
tgtgagttttctaagcttgttgtgtataaagaacatcgtggtttcttattgcttgataat
cctgaaaaaacattaaaaatggaaagtttttataaatatgatatgatttttgttactgac
acttttactgaagattataaaacttcatccttttataaaaagttagaggagtttacagat
acaataaaactttttatagttcaaactaaaaaagaaaattcagaagagcttacacttaat
attaataaaaaaaagacatttggttatttaaagaaaaaaatagaagatttgattaatgtt
gaacaacatttgtttcggatttatcgtatttcatttgatcaagagtatgaatgcattagg
cttgaagatactctaagcaccatgaataatggtgctaagataattgtaaagttgggcaga
gcattgatgactggagaatcgagagttaaagtttatctatttgaacccaacaatgaagat
cccatgacgttttttatggaagctgtggcatacaagggcttgaccataggggaattcaaa
aagcagatttttttggaactaaatagagttggaaaagatcatccaattgaaagaattcgt
gtaagaagaaaagcgtctaaaaacccttgtcgcatttacacaaacaatgatcgatttgag
gtagaagtgaaattaactgaccttcttgttgagttgttacaagaaaatgatatcattgta
aatgatgactacttaaatttatatgccaaacgatggagaccgtcacaacttcttctatgc
ccatttgaagaaataattttgtataaagacacttcccttgttaacttaaaaaaaaagcta
agtgaaaaaagtggcatcccattaaatcaagtcagtattgccaaggggcgtggagttttc
ccttgcatggtatcaatactagatatatataatgagctggaatgggattgtaattgccaa
aaacttggtgaatatccaatatcaataactgatgatggtagtgtaatatactatagagat
aataaagaagaaataaaagaattgacttttgacgaaagaagagaaataaggctcagtgaa
aggaaacaatatcatccctttcaacattctaaagaaaaatcattaaaaatatacgctaat
ggtgttaagaactaa
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