Hyphomonas neptunium: HNE_0393
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Entry
HNE_0393 CDS
T00397
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
hne
Hyphomonas neptunium
Pathway
hne00470
D-Amino acid metabolism
hne00550
Peptidoglycan biosynthesis
hne01100
Metabolic pathways
hne01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
hne00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HNE_0393
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HNE_0393
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HNE_0393
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hne01011
]
HNE_0393
Enzymes [BR:
hne01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HNE_0393
Peptidoglycan biosynthesis and degradation proteins [BR:
hne01011
]
Precursor biosynthesis
Amino acid ligase
HNE_0393
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
DUF6716
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
ABI78208
UniProt:
Q0C570
LinkDB
All DBs
Position
complement(387251..388171)
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AA seq
306 aa
AA seq
DB search
MKRDTKRVAVIYGGWSSERPVSLSSGQQMAAAARKAGYDVTEIDVTRELASQLAEAEPDV
VLNGLHGPWGEDGCVQGLLEVMGLPYSHSGVLASALAMDKLKSKAVYRSAGLDVAADKRV
TRAEAAAAHALPPPYVVKPVNEGSSFGVLIVREGANGPPHELTGPNWRYGDYLMAEEYIP
GRELTVAVLGDRALAVTEITTLRDYYDFDAKYAAGGSRHVIPADLPAKVTEAAMDAALLA
HRALGCRGATRSDFRYDEQKDRLVILETNTQPGMTPTSLVPEQAAHMGMSFEDLVAWMIE
DASCQR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggacacgaaacgggtagcagtgatttatggcggctggtcttcggaacggccg
gtctccctgtcttccggccagcagatggccgccgccgcccgcaaggccggctatgacgtg
accgagatcgacgtgacccgtgaactggcgagccagctggcagaggccgagcccgatgtg
gtgctcaacgggcttcatggcccctggggcgaggatggctgcgtgcagggcctgctcgaa
gtgatgggcctgccctactcccattccggcgtgctcgcgtctgccctcgccatggacaag
ctcaaatccaaagccgtctatcgcagcgccggtctcgatgttgccgctgacaagcgcgtc
acccgcgcagaggccgccgccgcccatgccctgcccccgccttacgtggtcaagccggtg
aacgaaggctccagcttcggcgtgctgatcgtgcgcgaaggcgccaacggcccgcctcac
gagctgaccggcccgaactggcgctatggcgattatctgatggcggaagaatacatcccc
ggccgcgagctgaccgtcgccgtgctgggcgaccgggccctggctgtcacggaaatcacg
accttaagggactattacgattttgatgcaaaatacgcggctggtggatcaaggcatgtg
atcccggcagacttgcccgcgaaagtgacggaggcggcgatggacgccgcgctgctcgcg
caccgggcgcttggctgtcgcggcgctacacgctcggacttccgctatgacgaacagaag
gaccggctcgtgatcctcgaaaccaatacccagcccggcatgacgccgacctcgctcgtg
cccgagcaggccgcgcatatgggcatgagtttcgaagacctcgtcgcctggatgatcgag
gacgcctcatgccaaagatag
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