Vreelandella neptunia: SR894_19190
Help
Entry
SR894_19190 CDS
T09634
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
hnp
Vreelandella neptunia
Pathway
hnp00630
Glyoxylate and dicarboxylate metabolism
hnp00680
Methane metabolism
hnp01100
Metabolic pathways
hnp01120
Microbial metabolism in diverse environments
hnp01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
hnp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SR894_19190 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
SR894_19190 (fdhF)
Enzymes [BR:
hnp01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
SR894_19190 (fdhF)
BRITE hierarchy
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4_10
Fer4_8
Fer4
Fer4_21
Fer4_9
Fer4_16
Fer4_2
Fer4_4
Fer4_6
Fer4_18
Fer4_22
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
WQH12253
LinkDB
All DBs
Position
complement(4157621..4160455)
Genome browser
AA seq
944 aa
AA seq
DB search
MSEQNANNRFTLTLDGVEISAYPGESLWQVAKRAGETIPHLCFKDASGYRADGNCRACMV
EIEGERALAASCLREAAPGMVVKSANSERAHTARKMVMEMLVVDQPEREASPDSSSHFWA
MADQLAIDATAVRRKLPRREEREAPTVHHVASRADSMAQDSSHSAMRVNLDACIECNLCV
RACREVQVNDVIGLAHRGAASKIVFDFDDPMGDSTCVACGECVQACPTGALMPATLVDQA
GHGDSAVADRKVDSVCPYCGVGCQLTYHIKDDEILYVEGRDGPSNENRLCVKGRFGYDYP
RHPSRLVTPLIRREGVAKGIDPDFDPAKPLTHFREASWDEALEAAASGLVNLKAAHGPDA
LAGFGSAKCSNEEAWLFQKLVRTGFGSNHVDHCTRLCHASSVAALMECIGSGSVTASFMQ
ASQADVVILTGCNPAVNHPVAATFFKQAAKRGTKIVILDPRGQSLDAYAHLSVRFSPGAD
VALFNAILNVIISEELYDTAYIAEHTEGFEALKTHTVDMTPEAMSGLCGVEPETIREVAR
LYANAERAMIFWGMGISQHTHGTDNARCLISLALACGQTGRPGTGLHPLRGQNNVQGASD
AGLIPMVMPDYQPVNDDQVRAAFEELWNTKLDPTPGLTVVEIMDAITAGTIRGMYIQGEN
PAMSDPDLAHARAALAKLEHLVVQDLFVTETAQFADVILPASAWPEKNGTVTNTNRQVQM
GRAALPLPGQAKPDWWIIQEIAKRFGLDWNYQHPRDVFAEMKQGMASLDHISWERLEREQ
SVTYPCPAEDAPGHDVVFSEAFPTVSGRAKFAPTRPLPPDEPVDNDYPTVLTTGRQLEHW
HTGSMTRRAKVLDDLEPEAVASLAPAEFIRLGIAPGDDLTIATRRGSITLKARTDPGMPE
GMVFVPFCYGEAAANLLTNPALDPFGKIPEFKYAACRLSRSDVA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacagaacgcaaacaaccgctttaccctgacgctggacggcgttgaaatcagc
gcttaccccggtgaaagcctctggcaggtagccaagcgcgccggcgagaccattccccac
ctgtgtttcaaggatgccagcggctaccgcgccgacggcaactgccgcgcctgtatggtg
gaaatcgagggcgagcgggcgttagccgccagctgtctgcgcgaagcggcccccggtatg
gtggtcaagagcgccaactccgaacgcgcgcacaccgctcgcaagatggtcatggaaatg
ctggtggtcgatcagcccgagcgggaagcgagccccgacagctcaagccatttctgggcc
atggctgaccagctcgccattgatgccacggcggtgcgccgcaagctgcccaggcgcgaa
gagcgtgaggcgcccaccgtgcaccatgtggcgtcccgggcggatagcatggcgcaggac
agcagccactcggccatgcgcgtcaatcttgacgcctgcatcgagtgcaacctgtgtgtg
cgcgcctgtcgcgaagtacaggttaacgacgtgattggcttggctcaccggggggcggcg
tccaagatcgtgtttgatttcgacgaccctatgggggatagcacctgcgtggcctgtggc
gagtgcgttcaggcctgccccaccggcgccctgatgcccgctaccctggtcgatcaggcg
ggccacggcgattctgccgtcgccgaccgtaaggtcgactcggtatgcccctactgcggg
gttggctgtcagctcacctaccatatcaaggacgatgagatcctttatgtggagggccgc
gacggcccctctaacgagaaccggctatgcgttaaaggccgcttcggctatgactatccg
cgccatccatcccggcttgttactccgctgattcgtcgcgagggtgtcgcaaaaggaatc
gacccggacttcgacccagccaagcccttgacgcatttccgcgaggcgagctgggacgaa
gccctggaggctgccgccagcgggcttgtgaaccttaaagcggcccatggccctgatgcc
ctggcggggttcggcagcgccaagtgttccaacgaagaggcgtggctgttccagaagctg
gtgcgtaccggctttggctccaaccatgtggatcactgtacccgcttatgccacgcaagc
tccgtggcggcactcatggagtgtattggttcaggctcggtaaccgcctcctttatgcag
gccagccaggccgacgtggtgattcttaccggctgtaatcccgcggtaaaccatccggtg
gcggccaccttctttaaacaggccgccaaacgcggtaccaagatagtgattctcgacccc
cgtggtcagtcgctggatgcctatgcccacctgagcgtgcgcttttcacccggcgccgat
gtggcgctgtttaatgccattctcaatgtgatcatcagcgaagagctttatgacacggcc
tatatcgccgagcataccgaaggctttgaggcattgaagacgcatactgtggacatgacc
cccgaagcgatgagcggcctgtgcggcgttgagcccgagaccattcgcgaagtggccagg
ctatatgccaacgccgagcgggcaatgattttctggggcatgggcatttcccagcacacc
cacggtaccgataacgcccgctgcctgatctcgctggccttggcctgcggccagaccggt
cgccctggcaccggcctgcaccctttgcgggggcagaacaacgttcaaggggcttctgat
gccggcctgattcccatggtcatgcccgactaccagccggtcaatgatgatcaggttcgt
gcggcgttcgaagagctgtggaataccaaactggatcccacgccgggtctcaccgtggtg
gaaatcatggatgccatcaccgcgggcaccattcgcggcatgtatatccagggcgaaaac
ccggcgatgtccgacccggatctggcccatgcccgggccgccctggccaagctggaacat
ctggtggtgcaggatctgtttgtcacggagactgcccagtttgccgatgtcatcctgcct
gcatccgcctggcctgagaaaaacggcaccgtcaccaacaccaatcggcaagtgcagatg
ggacgtgcggcgttgccgctaccgggccaggccaagccggactggtggattatccaggaa
atcgccaaacgctttggcctggactggaattaccagcatccacgggacgtcttcgccgag
atgaaacaaggcatggcctctctcgaccatatttcctgggagcgtttggagcgcgagcag
tcggtgacctatccctgcccagcggaggacgcacctgggcacgacgtggtcttcagcgag
gccttcccaaccgtcagtggtcgtgcgaagttcgcgcctacgcgcccgctgccaccggat
gagccggtagataacgactatcctacggtgctgaccaccggtcgccagctggagcactgg
cacacgggttccatgacccgccgtgccaaagtgctcgatgacctggagccggaagccgtg
gcgagcctggcgcccgctgagtttatccgactgggtatcgccccgggcgatgatctgacc
attgccacccggcgaggatccatcaccctcaaggcgagaaccgacccgggaatgcccgaa
ggcatggttttcgtgcccttctgttacggcgaagcggcggcgaatctactcaccaatccg
gcgctggatccgttcgggaaaattcccgagttcaagtacgccgcctgccgactgagccgc
tcggacgtggcctga
DBGET
integrated database retrieval system
