Hemiscyllium ocellatum (epaulette shark): 132815438
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Entry
132815438 CDS
T09720
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03013
Nucleocytoplasmic transport
hoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132815438 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
132815438 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hoc03019
]
132815438 (thoc1)
03041 Spliceosome [BR:
hoc03041
]
132815438 (thoc1)
Messenger RNA biogenesis [BR:
hoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
132815438 (thoc1)
Spliceosome [BR:
hoc03041
]
Complex C
Other components
EJC/TREX
132815438 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132815438 (thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
132815438
NCBI-ProteinID:
XP_060680355
LinkDB
All DBs
Position
4:86740081..86824454
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AA seq
661 aa
AA seq
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MSPGLFQFNEARQKFSIYTKEALNIKNVKPLILIFSQLSGGETEKKTTLDQAFRGVLEEK
ILEQGECEDFLAIISLSINGVTEGICSATTPFLLLGDVLDCLPLDQCDRIFTFVEKNVGT
WKSATFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFN
LENVTVFNTNEQDSTLGLKNFQHTEDREDGMEVEEGETGDEEPTTTCSVPIDYNLYRKFW
SLQDFFRNPLQCYEKISWKTFLKHSDEVLDVFRSYKLDDMQASKKKHEELKPPGEEHVYF
AKFLTSEKLMDLQLNDSNFRRHILLQYLILFQYLKGQVKFKSSSCVLTDEQSLWIEDTTK
AVYQLFKETPPDGEKFSSMVEHILHSEENWIAWKNEGCPSFVKERSLESKFPKPAKKRPA
PEDFFGKGPGKKVLMGNEELTRLWNLCPDNMEACKSESREFMPTLEEFFEEAIEQADPEN
MVEEEYKVVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLDNMVIKLAKELPPPSE
EIKTAEDEDEEEDNDDALLKESNESPDMQTKLVTGEQIDILANKLGEQWKVLAPHFEMKE
SDIRGIESDSEDVKMRAKLLLVAWHDREGLQATVENFLSALIDAGLTELAEILTNEADSL
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctggtttgttccagtttaatgaggctcgacagaaattcagtatttatacaaaa
gaagctttgaacatcaagaatgtcaagccactaattcttatcttcagccaattgagtgga
ggtgaaacagaaaagaaaacaacattggatcaagcatttagaggtgttctggaagaaaaa
attttagaacaaggagaatgtgaagatttcttggctataatctccctcagcattaatgga
gtcacagaaggtatctgttccgcaacaacaccctttctactgcttggtgatgtgctcgat
tgccttcctcttgaccagtgtgacagaatatttactttcgttgagaaaaatgtaggaact
tggaaatctgcaacattttactctgctggaaaaaactacttgttgagaatgtgcaatgat
ttgctgcgaagactttccaaatcacaaaacactgttttctgtggaagaattcagttattc
ttggccagattgtttcctttatccgaaaaatcagggcttaatttgcaaagtcagtttaac
ctggaaaatgtcactgtgtttaacactaacgaacaggatagtacactggggctgaagaat
tttcagcacactgaagatagagaggatggaatggaagttgaagaaggagaaacaggcgac
gaggagccaactacaacttgctctgttccaattgattataacttataccggaagttttgg
tcacttcaagattttttcagaaatccactgcagtgttatgaaaaaatttcttggaagaca
tttctaaagcattcggatgaggtgttggatgttttcagaagctacaaactggatgatatg
caggcttcaaagaaaaagcatgaagaattaaaacctccaggggaggaacatgtttacttt
gcaaaatttttgacgagtgaaaagttgatggacctacagctgaacgacagcaattttaga
cggcatatcctattacagtatttaatattgtttcaatacctgaagggtcaagtcaaattt
aaaagttcctcttgtgtgctgactgatgaacaatctctctggattgaagataccaccaaa
gcagtttatcagttattcaaagagacaccacctgatggagaaaagttttctagcatggta
gagcatatactacacagtgaggaaaattggattgcatggaaaaatgaaggttgtccaagc
tttgttaaagagagatcacttgaatccaaatttccaaagcctgcaaaaaaacgacctgct
cctgaggatttctttggaaaagggccaggcaagaaggtcttgatgggaaatgaagaattg
acacggctttggaatctgtgccctgataacatggaagcctgtaaatctgaaagcagggaa
tttatgcccactttggaagagttttttgaagaagctattgagcaagctgatccagaaaac
atggttgaagaagagtacaaagtggttaacaattccaattatggctggagggccttgagg
ctgctggcacgacgaagcccacatttctttcaaccaactaatcagcagttcaaaagcttg
cctgagtacctagacaacatggttatcaaattggccaaggaactacctccgccctctgaa
gagataaagacagcagaggatgaggatgaagaagaagacaatgatgatgcattgctaaag
gaaagcaatgaaagccctgatatgcagactaagcttgtaacaggtgaacagatagacata
ctcgctaacaagcttggagaacagtggaaagtattggcaccacactttgaaatgaaggag
tctgacatccgtggaattgaatctgatagtgaggatgtgaagatgcgtgctaaactgctg
ttggttgcatggcatgatcgggagggactgcaagctacagtggagaattttttgtctgca
ttgattgatgctggtttaactgaacttgcagaaatcctgacaaatgaggctgatagtcta
agctaa
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