Hemiscyllium ocellatum (epaulette shark): 132820931
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Entry
132820931 CDS
T09720
Name
(RefSeq) cullin-4A-like isoform X1
KO
K10609
cullin 4
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Pathway
hoc03420
Nucleotide excision repair
hoc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132820931
09124 Replication and repair
03420 Nucleotide excision repair
132820931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hoc04121
]
132820931
03400 DNA repair and recombination proteins [BR:
hoc03400
]
132820931
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hoc04147
]
132820931
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
132820931
DNA repair and recombination proteins [BR:
hoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
132820931
TCR (transcription coupled repair) factors
Cul4-CSA complex
132820931
Exosome [BR:
hoc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
132820931
BRITE hierarchy
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
132820931
NCBI-ProteinID:
XP_060689289
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Position
12:10832982..10895897
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AA seq
851 aa
AA seq
DB search
MLRPAAGPPAPPSIPEEGEGERPAADVREPGGQARKRQRRAEAPAPAPAPAGSRSSSPPE
PLGAKRRYRGCTNPAEGDGEAETEAAAAADDPAVAEQRPPHSRKANLSAAALLGHPNGVS
RAATPGAGPAASRKLLIKNFRDKPKLPDNYTQDTWRKLHEAVDAIQNSTSIKYNLEELYQ
AVENLCSYKVSATLYKQLRQVCEDHVKAQILQFREDSLDSSLFLKKINKCWQDHCRQMIM
IRSIFLFLDRTYVLQSSMLPSIWDIGLELFRTHVINDRIVRTKTIDGILLLIQKERNGEA
VDRSLIRSLLSMLSDLQVYQESFEQRFLEETNCLYAAEGQRLMQKREVPEYLHHVNKRLE
EEADRVITYLDQSTQKWLIASVEKQLLGEHLTAILQKGLNQLLGEKRIVDLALLYQLLSR
VKGGLQALLQHWNEYIKTFGSTIVVNPEKDKTMVEELLDFKDKIDHVIEVCFLKNEKFVN
AMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELERMLDKIMIIFRFIHGKDV
FEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMVQF
KQYIQNQSDPSKIDLTVNILTMGYWPTYTPMEIHLPAEMIKLQEVFKTFYLGKHSGRKLQ
WQPTLGHSVLKAEFKEGKKELQVSLFQTLVLLMFNEGNEFTMEEIKTATGIEDSELRRTL
QSLACGKARVLNKVPKGKDVEDGDKIVFNDDFKHKLFRIKINQIQMKETVEEQTSTTERV
FQDRQYQIDAAIVRIMKMRKTLSHNLLVSELYNQLKFPVKPGDLKKRIESLIDRDYMERD
KDNANLYHYVA
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggccggcggcggggcctccggctcctcccagcatccccgaggagggggagggg
gagaggccggccgccgatgtgagggagcccgggggacaggcgaggaagcggcagcggaga
gccgaggccccggccccggccccggccccggcggggagccgctcctcctcgccccctgag
ccgctgggcgccaagcggcggtatcggggctgcaccaacccggcagagggtgacggagag
gccgagaccgaggccgcggccgcggctgacgaccccgccgtggccgagcagcggccgccg
cactcgcgcaaagccaacctgtcagcggcggcgctgctcgggcaccccaacggtgtgagc
agggcggcgacccccggggccgggccggcagcctccaggaaactgctcatcaagaacttc
agagataaaccaaaattgccagacaactacactcaggatacatggcggaaacttcatgaa
gctgtggatgccattcagaatagcacatcaataaaatataatttggaagaactttatcag
gccgttgagaatctgtgttcctataaagtgtcagcaaccctatacaaacaactgagacag
gtatgtgaagaccatgtgaaggcacagattttgcagtttcgggaggactcgctggatagc
agtctgtttctgaagaagattaacaaatgttggcaggaccactgtcgccaaatgataatg
atcaggagcattttcttgtttctcgaccgaacctacgtgctgcagagttcaatgctgcca
tctatctgggacataggtttagagcttttccgaacccatgtcatcaatgacagaattgtc
cggaccaaaaccatcgacgggatccttttgctgatccaaaaagagcgaaatggggaagct
gtggacagaagcttgatccgaagtttgctgagtatgctgtctgacctgcaggtctaccag
gaatcatttgaacagagatttttggaggagaccaattgtttatatgcagcggaaggccaa
agactaatgcaaaagagggaggtgccagagtaccttcaccacgtgaacaaacgcctggag
gaagaagcagatagagtgattacttacttggatcaaagcacgcaaaaatggttgattgcc
agtgtcgagaagcaactgcttggtgaacatctgacagcaattcttcagaaaggcctcaat
caactactgggtgaaaaacgaatagtggacctggctcttctttaccaactgctcagcaga
gttaaaggtggtctgcaggctctcctgcaacactggaatgaatatatcaagacctttggc
agtacgatcgtggttaatccagagaaggacaagacgatggtggaggaactgctagacttc
aaagataaaattgaccatgtcattgaagtgtgctttcttaaaaatgaaaaatttgtcaat
gcaatgaaggaagcttttgagactttcataaataaaagacccaacaagcctgctgagctg
atagccaagtatgtggattcaaaattgcgagctggtaacaaagaggccacagacgaagaa
ctggaaagaatgctggataaaatcatgatcatatttcggtttattcatggtaaggatgta
tttgaggccttctataagaaagacttggcaaaacgtctcctggtgggaaaaagtgcttct
gttgatgctgagaagtcaatgctgtccaagctgaagcatgaatgtggtgctgccttcacc
agcaagttggagggaatgtttaaggacatggagctctcgaaagacattatggtccaattt
aagcagtacatccaaaatcagagtgatccaagcaagatagatctgactgtcaatattctg
acaatgggatactggccaacatacacacccatggaaatacatttacctgctgagatgata
aaattgcaggaagtatttaaaacgttttaccttgggaaacacagtggcagaaaactccag
tggcagccaacattggggcactctgttttgaaagcggaattcaaagagggtaaaaaggag
ctgcaggtttcactcttccagactttggtgctgctaatgttcaatgagggaaatgaattt
actatggaggaaataaagactgcaacaggcatagaggatagtgaattaagaaggacattg
cagtcgttagcctgtgggaaagctcgggtgttgaacaaagttccaaaaggaaaggatgta
gaagatggagacaagattgtcttcaacgacgacttcaagcacaaactgttcagaataaag
atcaaccaaatccagatgaaagaaactgttgaggagcaaacgagcacaactgagcgggta
ttccaggatagacagtaccaaatagacgctgctatcgttcgaatcatgaaaatgaggaag
acactcagccataacctccttgtttcagaactctataaccagttaaaatttccagtgaag
ccaggagacctgaagaaaagaatagagtcactaattgaccgggactatatggagagagac
aaagacaatgccaacctgtaccactatgtggcataa
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