Hemiscyllium ocellatum (epaulette shark): 132823033
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Entry
132823033 CDS
T09720
Symbol
chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hoc03036
]
132823033 (chd6)
Chromosome and associated proteins [BR:
hoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132823033 (chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
132823033
NCBI-ProteinID:
XP_060692563
LinkDB
All DBs
Position
15:67409077..67677739
Genome browser
AA seq
2768 aa
AA seq
DB search
MACFLMGADTALAYPGEVRYQPSTSKASKHPLTSDAPHVDGHTAQLSHTSSKDQPTLLNA
AKAPEPAGPLIETSSKSDAQGALEDVNVDQTLTLSKAEDGGTRVKKKRKKKEPKEEAGSE
TATGDSAPKPKKKRKEPKGDKEPKESKVAKEPKGSKGPKGIREPKEPKGAKGAKEPKELK
GAKEPKQPKEPKCKSNTTPKTKSSKKASKEQGPTPTEKKKKGKRKSVVPGDNSEQEQSTA
KASQGTEELTDAQKRRSGRQVKRRKYNEDLDFKVVDDAGETIAVLGAGRISPNSGSSQKG
NQTMENQEEDESAVIEKILAMRTVQKETPGGKPQEVEEFYVKYRNYSYLHCKWATVEELE
KDKRIHQKIKRFRTKRAQMKNLFVEPDEEPFNPDYVEVDRILDVAHTIDAETSEPVTHYL
VKWCSLPYEESTWELVEDIDPVKIQEYEDLQIIPEVSNLERPPAETWKKLELSRPYKADN
KLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLYEIYLLGIRGPFLIIAPLS
TIANWEREFRTWTEVNVIVYHGSQISRQMIHQYEMHYKDAEGAPVQGLFKFNVIITTFEM
ILADCPELRKIQWSCVIIDEAHRLKNRNCKLLEGLKLMALDHKVLLTGTPLQNTVEELFS
LLNFLEPGHFPSEATFLEEFGNLKTDEQVKKLQAVLKPMMLRRLKDDVEKNLAPKEETII
EVELTNIQKKYYRAILERNFSFLAKGANQANMPNLLNTMMELRKCCNHPYLINGAEEKIL
DEFREVHNPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYL
IHRRYTYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDS
DWNPQNDLQAQARCHRIGQNKAVQVYRLITRNSYEREMFDKASLKLGLDRAVLQAMNRKG
NTNGVQPLSKIEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTRTITIESEGKGS
TFAKASFVASGNRTDISLDDPNFWQKWAKIAELDIESKNGKDSLVIDTPRVRKQTKHYNS
FEDDELMEFSELDSDSEDKPSRSRRLHDKTRRYLRAECFRVEKNLLIFGWGRWKDILSHG
RFKWHLTEKDMEIICRTLLVYCLKHYKGDEKIKSFIWDLITPTKDGQNQALHNHSGLSAP
VPRGRKGKKIKTPLSQPELKNADWVASCNPDVLFHDDGYKKHLKQHCNKVLLRVRMLYYL
KQEVLGEAADKALDGIDASKLDVWIPDVDYNDMPVDWWGGDSDKSLLIGVYKHGYERYNA
MRADPALCFLERVGMPDETSLAAEQGGADLSSDITEGVDLCKGDDSELKSDGQFKDLPDE
DVNSCNESGIMEKGEDSHLAQDGMDIDRPQWPVASVLTARLRRLITAYQRCNRKEMVRME
SLARNNRRRWYPQDEIWGRVPEMDIVTMDIQQRWTRREQTDFYRVVSTFGVVYDPDRKQF
NWNQFRSFARLERKTDGSLERYFRSFMAMCRSVCRLPLKKEEPSDPSIFVEPITEERASR
TLYRIELLRKVREQVLRSPQLNERLKLCRPSLYLPVWWECGKHDRDLLIGAAKHGLSRTD
YYILNDPQLSFREAHRNYVQNGSSYFQNVPAPYSQSSLNLSQSASPASTVLTLGEKDNIE
QMDMEQEKMEEALEEPSPEAGALAVCLEVKNEEDATDSTRRRDATQAKARPPDPVAARNE
WGATSCIQAGFFSMPDSHMESKGTREFGGNCSDNNGGESLQNPILKCSSPMENLQAVCGD
ANQTRINCLNFLQVKSNGVLELQTVSEKMADSVVAPVCSVAGTEPVKDTVLGVIAKHDLK
QCEMLKAENGCSEDKQSTEIIDRENVMIEHTYDMQAKYLAMGHLQTAANGLDKPQVEINQ
LSDPNSPPATPKHSDVSDDLKLMEAVPGCEQQAVAVNENSSTTEAGNMTNVHPESDHVPF
EAVGVKCLPSGLQSFRAAHSIVKVVDGAPGSPSEQVDVAPIKQEVTFRHLLEDCIKEHDS
PCETEEKSEEDSSQPEGAIALKNFDEESNTSTSLGQDEIQDNLLQDIREPTIAQLLQEKT
LYSSAEWPKDRVIINRIDNICHAVLKGKWPSAQQQSLEPQGGMYSMATPTETLSMRSCLS
VPVQAAHTLSIADGSLSAQHLTKESLLTLTFPRDQRKRRRKYEFETDRGAKRKNVEEVSP
SLTRPPVILNGWQETAMDLSKASEEASGSVPVVISASTPKLGSLEPSSAFRADMAGVLQA
GLVHPVTGQVMNGAFRGDDTSRRRRGRRKNVEGIDILFMKEKKPDNLEVDLSKQLFSGVA
RSADSMSNMMIKLPQGKQRLPTEEEQKNKSLIEWLRQHPTYTMDVSNLAPNCTAILHGLS
ERPKQRRHRCKDPSKLDINTLTGEERVPVVHKGSGRKLGGAMAPLIKELPRWLDANPEYA
VAPEWAEIVKHSGFLPESKFSRILTEPVVKEAGGRKRGRRPRSEMAKSGGVLTETATAMG
PMFMNGLIAGMDLVSLQNLRNIHNLQLAGLMGFPAGFAAIPSGEDGKSSLNMLPMMLPGV
TGMSHVFGVGGLLNSPPVVTSASSSSSSTLTTSTSSKEDVGGEQKGNTAESMKHQEGSST
GDKPGPSSSFSDSGEARVTTSNPLSFNPFLLHSMPAGLIYPSMFLPHGIGMAMPSFAQAG
HSEADGTESPKKKRKKAKEETTRDGTEASPQQTTAEESTGKSTDSTAVQDSSGQETEKDS
VEGTQNAE
NT seq
8307 nt
NT seq
+upstream
nt +downstream
nt
atggcctgctttttaatgggggcagacactgcactagcttaccccggtgaagttagatat
cagccttccacttcaaaggcatccaagcatccgctgacatcagatgccccgcatgttgat
ggacacacagcacagctctcgcacacaagctccaaggaccaaccaaccttactcaatgca
gcaaaagctccagaaccagctggacccttgattgagaccagcagcaagagtgatgctcaa
ggtgcgctggaagatgtgaacgtggaccaaacactaaccctttccaaggccgaggatgga
ggcacaagggttaagaaaaaaaggaagaaaaaagagccaaaggaagaggcaggtagtgaa
acagcaaccggcgacagtgcacccaaaccaaagaagaagagaaaggagcccaaaggagac
aaggaacctaaagagagcaaagtggctaaggagccaaaaggttctaaaggacccaagggc
atcagagaaccgaaggaacctaaaggggccaaaggggccaaagaaccgaaggagcttaag
ggtgcaaaggaacccaagcaacctaaagagccaaaatgcaaatccaacactacccccaaa
actaagagcagcaagaaagccagcaaagagcaaggcccaacgccaactgaaaagaagaag
aaaggtaaaaggaaaagtgttgttccaggggataattccgaacaagaacagtctacagca
aaagcttcacagggcacagaagaactaacagatgcacagaagcgacgatcaggccgtcaa
gtaaaacgaaggaaatacaatgaagacttggacttcaaagttgtcgatgatgccggtgaa
acaattgctgtactgggagcagggcggatttctccgaactctgggtcctcacagaaagga
aaccagacgatggagaatcaagaggaggatgaatctgctgtcattgagaagatactggcc
atgcgcactgtgcagaaggagactcctggtgggaagccgcaggaagttgaagaattctat
gtcaaatacagaaattactcttacctgcactgcaaatgggccacggtggaggagctggag
aaagacaaaaggattcaccagaaaatcaaacgtttcaggaccaaacgggcccagatgaaa
aatctttttgttgagccggatgaggaaccctttaatccagactatgttgaagtagacagg
atcctggatgtggcacatacaatagatgctgaaacttcagagcctgtgactcattacctg
gtgaaatggtgttctctaccctacgaagaaagcacttgggagctagtggaagacattgac
ccagtcaagattcaggagtatgaggacttgcaaatcattcccgaagtctcaaacttggaa
cgccctcctgctgaaacttggaaaaaactggagctgtcacgaccatacaaggcagacaat
aaactcagggagtaccagctggaaggaatgaactggctgctcttcaactggtacaacagg
aaaaattgcattctggcggatgaaatgggtctggggaagacgattcaatcaattacattt
ctgtatgaaatatacctgttgggaatccggggacctttcctcattattgcacctctctcc
acgatagccaactgggagcgagagtttcgaacgtggacagaggtgaacgtaattgtgtat
cacggcagtcagatcagtcgccagatgattcaccagtacgaaatgcactacaaggatgct
gagggagctccagttcagggacttttcaagttcaatgtaatcatcactacatttgaaatg
attctggctgactgtcctgaattgcgaaaaatccagtggagttgtgtgattatcgatgaa
gcccacagactgaagaacaggaactgtaaactgcttgagggtctcaaactcatggcactg
gaccacaaagtacttttgactggaacccctttgcaaaacacagtggaagaactcttcagt
ttgttgaattttctcgaaccaggtcactttccttctgaggctaccttcctggaggagttt
ggaaacctgaagactgatgagcaggtgaagaaactgcaggcagtgctgaaacccatgatg
cttcgaagactgaaggatgatgtggaaaaaaacctggctccaaaggaggagaccatcatt
gaggtggaactaaccaacattcagaaaaagtactacagagccatccttgagagaaacttc
tccttcttagcaaaaggagctaaccaggccaacatgccaaacctgctgaataccatgatg
gaactgagaaagtgttgtaaccatccctacctgatcaatggtgccgaagagaaaatcttg
gatgagttccgtgaagtgcacaatcccgatgctcctgattttcagctgcaggccatgatt
caagcagcgggtaaattggtgctgatcgacaaactgttgcccaaactgattgctggtggg
cacaaggtgctgatcttctctcagatggtgcgctgcctggatatattagaagattacctc
attcacagacggtacacctatgaacgcattgatggcagagtaagggggaacctgaggcag
gctgcaatcgaccgcttttccaaaccagactccgaccgatttgtgtttctgctgtgcacc
agagccggaggccttggtatcaatcttactgcagcagacacttgtatcatctttgattcg
gattggaacccacagaatgacctgcaggctcaggcccgatgtcaccggataggacagaat
aaagcagttcaggtgtatcgactaataactcgcaactcgtatgagcgagagatgttcgac
aaagccagtctcaagctgggtctcgacagagcagtgctgcaagcgatgaaccgcaaggga
aacacgaatggggtgcagccattgtctaagatcgaagtggaagatttgcttcgtaaagga
gcatatggagccctgatggatgaggaagatgaaggatcaaagttttgtgaagaggacatt
gatcagatattacttcgtcgaactcgcactatcaccattgaatcagaagggaaggggtct
acatttgcaaaggctagttttgtggcatcagggaacagaaccgacatctctttagatgac
cccaacttctggcaaaaatgggccaaaattgcagagctggatattgagtcaaagaatgga
aaagacagtttggtgatcgacacaccacgtgtcaggaaacaaacaaaacactataattcg
tttgaggatgacgagttgatggagttctctgagcttgacagtgatagtgaagataagcct
tcaagatctcgccgtcttcatgacaagacccgccgatatctcagagcagaatgctttcga
gtggaaaagaacctgctgatatttgggtggggacgatggaaggacattctttcacatgga
cgattcaaatggcacctgacagagaaggacatggagattatttgtcgaactctcctggtt
tattgcctgaaacactacaaaggcgatgagaaaattaaaagcttcatctgggatcttatt
actcccacaaaagatggacaaaatcaagcattgcataatcattcgggattatcagcacct
gtacccagggggcggaaaggcaagaagataaaaacaccactctctcaaccagagctgaag
aacgctgattgggtggccagctgtaaccctgatgtgctcttccatgacgatggctataag
aaacaccttaaacaacattgcaacaaggtcttactgcgtgtacgaatgctgtattacctt
aaacaggaagtgctaggagaagctgctgacaaagctttggatggtattgatgcaagtaag
ctggatgtctggattcctgatgtggactacaatgatatgccagtcgactggtggggtgga
gactctgataagtccctgctcattggagtttacaagcatggttatgaacgctacaacgct
atgagagctgacccagcactctgcttcctcgaaagggttggcatgcctgatgaaacctca
ttagcagctgagcaaggaggtgccgacctgtcatcagacataactgaaggggttgacttg
tgtaagggtgatgactcagagttgaagtcagatggacaattcaaggacctgccagatgaa
gatgtaaactcctgcaatgagtcggggattatggagaaaggtgaagactctcatctagcc
caggatggtatggacattgaccgcccacaatggccagttgcttcagtgctcaccgctcgg
ctccgacgtctcataacagcttaccagcgctgcaatcgcaaagagatggtgaggatggaa
tctttagctcgcaataaccggcgtcgttggtatccacaggacgagatctggggaagagta
ccagaaatggacattgttaccatggatatccaacaacgctggacaaggagggagcagaca
gatttctatcgtgtggtttcgacatttggcgtggtgtatgatcctgaccggaaacagttt
aactggaaccagtttcgcagctttgccaggttagaaaggaaaacagatgggagcctggaa
aggtattttcgaagctttatggctatgtgccggagcgtgtgccgtttgcctctgaagaaa
gaagagccttcagaccccagcatttttgttgagcccatcacagaagaacgtgcttcaagg
actctataccggattgagctgttgcggaaagttcgggagcaggtactccggagcccacaa
ctgaatgaacggctgaaactgtgccgccctagtctgtacttgccagtgtggtgggaatgt
ggcaaacatgaccgcgatctgctgattggtgctgccaaacatggcctcagtcggacagac
tactatatccttaatgaccctcaactttctttccgtgaggcccacaggaactatgtgcag
aatggaagcagttacttccagaatgtcccagcaccttacagccaatcctcactcaacctc
agccagtctgcatcccctgcatccactgtactgactctaggagagaaagacaatattgag
cagatggatatggagcaagagaagatggaagaggctttagaagagccgagcccagaagca
ggagcactcgctgtttgcttagaagtgaagaatgaagaggatgctactgattccacaagg
aggcgtgatgctacccaagctaaagcaaggccacctgacccagtggctgcaaggaatgaa
tggggagctaccagttgcattcaggctggattttttagtatgccagattcacacatggag
tctaaaggaacaagagagtttggtggaaactgcagtgacaacaatgggggagagagtttg
caaaatcctatccttaagtgcagctctccaatggaaaacttgcaggctgtgtgtggtgat
gccaaccaaactagaataaactgtctgaactttttgcaggtgaaatccaatggtgtattg
gaattgcaaactgtatctgagaagatggcagacagtgtagtagcacctgtgtgtagtgtg
gctggaacagaacctgtgaaagacacagtacttggtgtgattgcaaaacatgaccttaaa
cagtgcgagatgcttaaagctgaaaatggatgttcagaagataagcagtcaacagagata
attgatcgtgagaatgtaatgattgaacatacctatgacatgcaggctaagtatctggcc
atgggtcatctgcagactgctgcaaatggcctagacaaaccacaagttgaaatcaaccaa
ctgtctgacccaaactccccacctgcaacgcccaaacattcggatgtctctgatgatttg
aagctgatggaagctgtgccaggctgtgaacagcaggctgtagctgtgaatgagaacagc
tcaacaacggaagctggaaatatgaccaatgtacatcctgaatcagatcatgtaccattt
gaggcagttggtgtgaaatgtctgcccagtggtcttcagtccttcagagcagcccattcc
attgtgaaggtagtggatggtgcaccagggtcaccatcagagcaagtagatgtggccccc
ataaagcaggaggtgaccttcagacatctcctggaggactgcatcaaggaacatgacagt
ccatgtgaaacggaagagaaatctgaggaagatagctctcaacctgaaggtgctattgca
ctgaagaattttgatgaggaaagcaatacgtctaccagccttggtcaagatgaaatccag
gacaacctccttcaggatatcagagagccaactatcgctcagctgcttcaagagaaaaca
ctctattcatctgcagagtggccaaaggatcgagtcatcataaaccgcattgacaatatc
tgtcatgccgtgttaaaagggaaatggccatcagcacagcagcagagccttgaacctcag
ggtgggatgtattccatggctactccgacagaaactctgagcatgagaagctgcctgagt
gttccagtgcaggccgcacacaccctcagcattgctgatggctccttatctgcccaacac
cttacaaaggagagtttactcacattaacattcccaagggatcagagaaagagacggcga
aaatacgagtttgagacagaccgaggagcaaagcggaagaacgtggaagaggtttctcca
tctcttactcgccctcctgtaattttaaacgggtggcaagagactgctatggacctctcg
aaggcttctgaggaggcatccggttcagtgccagtcgtcatcagtgcaagcacaccaaag
ctgggatcactagagccttcgagtgctttcagggcagacatggctggggtcctgcaggca
ggcctcgtccacccagtcactgggcaggtgatgaatggcgcctttagaggtgatgacacg
tcgaggaggaggcgaggacgaagaaagaacgttgaaggaattgacatcctctttatgaag
gaaaaaaagccagacaacttggaggtggacctatcgaagcagcttttctccggggtggct
cgctctgccgacagcatgtccaacatgatgattaaactcccccaaggcaagcagcgactg
ccaactgaggaagagcagaaaaacaagagtctgatcgagtggctgaggcaacatcccacc
tacactatggatgtgtccaacctggctcctaattgtacagcaattttacacggcctttca
gaacgtcccaaacagaggagacatcggtgcaaggaccccagtaaactggacatcaataca
ctgaccggggaggagagagtcccagttgttcataaggggagtggaagaaagctaggagga
gctatggcaccactgataaaggagctgccaaggtggctcgatgcaaacccagagtatgct
gttgcaccagagtgggcagaaattgtgaagcattcgggctttctgccagagagtaagttc
agccgcatcctgactgagcctgtggtgaaagaggccggtggcagaaagaggggaaggaga
ccaaggagtgaaatggcaaaatccggtggagttttgacagagacagctacggcaatggga
ccgatgttcatgaatgggctcattgctgggatggacctggtgagcctgcaaaacctcaga
aatattcacaatcttcagctggctgggctgatgggattcccagctggctttgctgcaatt
ccttctggagaggatggaaagagcagtctgaacatgttgcctatgatgctccctggcgtg
acggggatgtcacacgtgtttggagttggggggttgttgaacagccccccagtggtgaca
agtgccagcagttcgagttcatctaccttgacaacgagcacttcgtcaaaagaggatgtg
ggcggtgaacagaagggtaatactgcagagtccatgaaacaccaggaaggatcttcgaca
ggagataaacctggtccaagttcatctttctctgactctggtgaagccagagtcaccacc
agcaatccgttgtccttcaacccattcctgctgcacagcatgcctgctggactaatttac
ccatctatgtttcttccacatggcatcggtatggcaatgcctagctttgcacaagctgga
cactctgaagcagacggcaccgagagcccaaaaaagaaaaggaagaaagccaaggaggag
actacacgtgatgggactgaagccagcccacagcaaacaactgctgaagagagcacagga
aaatcgacagactccactgccgtgcaggacagttctgggcaggagactgaaaaagactct
gtagagggtacccagaatgctgagtag
DBGET
integrated database retrieval system
