Hemiscyllium ocellatum (epaulette shark): 132827685
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Entry
132827685 CDS
T09720
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
hoc
Hemiscyllium ocellatum (epaulette shark)
Brite
KEGG Orthology (KO) [BR:
hoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hoc04121
]
132827685
Ubiquitin system [BR:
hoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132827685
BRITE hierarchy
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
PolC_DP2
PknG_rubred
GldM_1st
Motif
Other DBs
NCBI-GeneID:
132827685
NCBI-ProteinID:
XP_060700326
LinkDB
All DBs
Position
25:complement(53557179..53594248)
Genome browser
AA seq
569 aa
AA seq
DB search
MAVSKVSISEAKLACAICLDLLKSPATIPCGHNFCMECIGRCWHQEGGSETFRCPQCRET
FSSRPSLSKNTILCEIVEDFSHADPACASKEAVTSQGVLCDFCTDEKLEAVKSCVVCMAS
YCEVHLQPHSNNPVFSDHRLIDPVRDIERRKCPSHRKPLEVFCRTDQKCVCCLCAINEHR
QHETVSVEEQVGELKKELNEQQTEVDKQLLETTEEIGKLQQKADSIKGMVLQVKHHTRTK
CTELVKTIERAQKDVLRYLDGEEEAVLSRVEESMKLLRITLAGLQDSKQQLQTALESDDS
LFVLQEHWRLNKPVRPVPISHCEADVNFSTVENAMTELSNHIAGQLHSCFNPHLEGEVSK
DNEKEIYTSPAIVCPMETKADLDSKQKADYVQHALRLTFDLNTAHKHLLLSDDNCTVTDV
DPESVPYPEHPDRFSNFPQVLCAESLSGGRCYWEVEISGHWAGMGVTYRGIKRKGSNMCS
LIGRNSLSWCLLYSNSKYSALHNKQEVSLQSGRYQRIGIYLDYPEGTLDFYGIDNTMSLI
HRFKTEFTEPVYPAFWVFLGTSLRICWLD
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtcgaaagtctccatctctgaagccaagttagcctgtgccatctgtctggat
ctcctgaagtcccccgcgaccattccctgtgggcacaacttctgcatggagtgcattggg
agatgctggcatcaggaaggggggtccgagaccttcaggtgccctcagtgccgagaaaca
ttcagctccaggccctccctctccaagaacactatcctgtgtgagattgtggaggacttc
tcccacgccgacccagcctgtgcctccaaggaggcagtcacctcccagggtgttctgtgt
gacttctgcaccgatgagaagctcgaagccgttaagtcatgcgtggtctgcatggcttcg
tactgtgaggtccacctgcagccccacagcaacaacccagtgttcagcgaccaccgactc
atcgatccggtcagggacatcgagaggaggaagtgtcccagccatcggaaacccctggag
gtattctgcaggactgatcagaaatgtgtctgctgcttatgcgccatcaatgaacacagg
caacatgagaccgtgtctgtggaagagcaagtgggcgaactgaagaaagaactcaatgag
caacagactgaggtggacaaacagctgctggagactacggaggagattggaaagctgcag
cagaaagctgactccattaaaggtatggtgctgcaggtcaaacatcacaccaggaccaag
tgtactgagttagtgaaaactattgagcgtgcacagaaggacgttctacgatatctcgat
ggtgaggaggaagctgtattgagccgggtggaagaatccatgaagctactgcggattact
cttgctgggctacaggacagtaaacagcaactccagactgccctggaaagtgatgacagc
ttgtttgtattacaggaacattggaggttgaacaaacccgtgcgccctgttcccatctcg
cattgcgaagctgatgtcaactttagcaccgtggaaaatgccatgactgagctgtccaat
cacatcgcaggacagctgcatagctgcttcaacccacatctggaaggagaagtctccaaa
gataatgagaaagagatctacaccagcccagcgattgtatgtcccatggaaacaaaggct
gatctcgacagtaagcagaaagcagattatgtacaacacgctctccggctgacgtttgat
ctcaacacggcgcacaagcacctccttctgtcggacgacaactgcacagtgacagatgtt
gaccccgaaagcgtcccttaccccgagcaccccgacaggttcagcaacttcccccaggtg
ctgtgtgccgagagcctttcgggaggccgctgctactgggaggtggagatcagtggacat
tgggcgggaatgggggtcacctacagggggatcaaaaggaaagggtcgaatatgtgcagc
cttattgggcggaacagtttgtcctggtgcctcctgtacagcaacagcaagtactcagct
cttcacaacaagcaggaggtcagtctgcagtccgggaggtaccagagaattggcatctac
ctggactaccccgagggcacgctggatttttatgggattgacaacacgatgagtttgatc
cacaggttcaagacagagttcaccgagcctgtgtaccctgctttttgggtttttctggga
acatctctccggatatgctggctggattag
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