Vreelandella olivaria: HORIV_25900
Help
Entry
HORIV_25900 CDS
T06227
Symbol
cafA
Name
(GenBank) axial filament protein
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
hol
Vreelandella olivaria
Brite
KEGG Orthology (KO) [BR:
hol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hol03019
]
HORIV_25900 (cafA)
03009 Ribosome biogenesis [BR:
hol03009
]
HORIV_25900 (cafA)
Messenger RNA biogenesis [BR:
hol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HORIV_25900 (cafA)
Ribosome biogenesis [BR:
hol03009
]
Prokaryotic type
rRNA processing factors
HORIV_25900 (cafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
BBI50169
LinkDB
All DBs
Position
1806131..1807594
Genome browser
AA seq
487 aa
AA seq
DB search
MSGEVLINLTPMETRVALVENGVLQEALIERSRRRGIVGNIYKGKVVRVLPGMQAAFVDI
GLERAAFIHAHEVMPPGTPLDEQQTIGQLLHEGQALVVQATKDPIGSKGARLTTHLSIPS
RYLVYMPDSPHHGVSQRIEDERERERLKALLDSSVAEQTLEVTGGFIVRTAAEGVGDEEL
KGDMHFLLRLWRKVSERKATATPQSVIYDDLPLFMRTLRDVMRDDIEKVRIDSRENFVKL
VEFAEEFMPDAVERIEYYPGERPIFDLYSVEDEIQKALGRKVQLKSGGYLVIDPTEAMTT
IDVNTGGYVGHRNLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMIDVEHQRQVLR
VLEKALERDHAKTKCTGVTELGLVQLTRKRTRESLEQTLCEACPTCSGRGTLKTPETVCY
EIFREILREERAYSAETYMVLASQPVVDRLLDEESAAVADLETFINKTIRFQVEQHYSQE
QYDIVLM
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtgaagttctcatcaatttaacgccaatggagacccgcgtcgcgctggtagaa
aatggcgttttgcaagaggcactgatcgagcgttcccgtcggcgtggcattgtgggcaat
atttacaaaggcaaagtggttcgcgtgctgcctggtatgcaggctgcctttgttgatatt
ggcttggaacgggcggcgtttattcatgcccacgaagtgatgccgcccggcacaccgctc
gatgagcagcagaccatcggccagttgcttcatgaggggcaggcgctcgtggtgcaggcc
accaaagaccccattggtagtaagggcgcgcgattaaccacgcatctgtcgatcccttcg
cgctatttagtgtatatgccggattcgccgcatcatggggtttcccagcgtatcgaagat
gagcgcgaacgcgagcgcttaaaagccctgctggatagcagcgtggcggaacagacactg
gaagtgacgggaggctttattgttcgtactgctgcggaaggcgtcggtgacgaagagcta
aaaggcgatatgcactttctgctgcggctgtggcgcaaggtcagcgaacgtaaggcaact
gcgacaccacaaagcgtcatttatgatgatttaccgctgtttatgcgcacgttacgcgat
gtaatgcgtgacgatatcgaaaaagtgcgtatcgattcacgggaaaatttcgtcaagctg
gtcgagttcgccgaagagtttatgcccgatgcggttgagcggattgagtactaccccggc
gagcgacccatctttgacctctacagcgtcgaggatgagatccagaaagccttggggcgt
aaagtacagctgaaatccggtggctatctggtgattgatcccaccgaggcaatgaccact
atcgatgtcaataccggtggttatgtcggtcatcgcaatcttgaagagaccattttcaaa
accaaccttgaagccgccacggcgattgcccgccagcttaggctgcgtaacctgggcggc
attatcattatcgactttatcgatatgattgatgtcgagcaccagcggcaagtgttacgt
gtgcttgagaaagcgttagagcgcgaccacgccaaaaccaagtgtactggggtcacggag
cttggccttgtccagcttacccgtaagcgaacccgggaaagcctggagcagacgctctgc
gaagcgtgccccacctgcagtggtcggggcacgcttaaaacgcctgaaaccgtctgctac
gaaattttccgtgagattctgcgcgaagagcgtgcctacagtgctgaaacctatatggtg
cttgcgtcgcagcccgttgttgatcgcttactagatgaagagtcagcggcggtggccgac
ctggagacgtttatcaataaaaccatccgctttcaggttgagcagcactattcccaagag
cagtacgatattgtgctgatgtaa
DBGET
integrated database retrieval system
