Hafnia paralvei: AL518_12210
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Entry
AL518_12210 CDS
T05667
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
hpar
Hafnia paralvei
Brite
KEGG Orthology (KO) [BR:
hpar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpar03400
]
AL518_12210
DNA repair and recombination proteins [BR:
hpar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
AL518_12210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
zinc_ribbon_2
zf-tcix
AAA_30
AAA_22
DZR
AAA_16
SLFN-g3_helicase
AAA
UPF0547
Motif
Other DBs
NCBI-ProteinID:
AMH18705
LinkDB
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Position
complement(2774378..2776138)
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AA seq
586 aa
AA seq
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MAFTLRPYQREAVDATIAHFRKHQEPAVIVLPTGAGKSLVIAELAKLARGRVLVLAHVKE
LVAQNHSKYCAYGLDADIFSAGLQQKESSGKVVFGSVQSVARNLPLFDGEFSLLIVDECH
RISDSDDSQYQQILQHLRSNNPNLRLLGLTATPYRLGKGWIYQYHYHGITRGDSNSLFRD
CIYELPLRYMIKNQFLVPPERLDMPVVQYDFSRLEPNSNGLFRETDLNRELKDQQRITPH
IVSQIMEFADTRKGVMIFASTVEHAREIHGLLPPEQAALVSAETPGDERDAIINAFKRQE
LLYLVNVAVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLSPGKTDCLILDYAGNP
HDLFTPEVGTTKPHSDSQPVQVFCPGCGFANTFWGKTTENGDIIEHYGRRCQGWLEDDEG
GREQCDYRFRFKTCPHCGAENDIAARRCHQCHQVLVDPDDMLKEALKLKDALVLRCGGMQ
LQHGEDDKGEWLSITYYDEDGADVSERFRLKTPAQRTAFMQLFLRPHLRAPGIELVWKRA
ADIVAQQEKLRYPDFVVARMKGRFWQIREKVFDYQGRYRKADSLRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggcctttactcttcgcccttaccaacgtgaggcggtggacgcaaccatcgcacacttc
agaaaacaccaagaacctgcggttattgtgttacctaccggcgcgggtaaaagtttggtc
attgccgagctggcaaagctggcccgcggccgcgttctggttctcgcccacgtaaaagag
ttggtggcgcaaaaccacagtaaatactgtgcttatggtctggatgccgatattttttcc
gccggtttgcaacagaaagagagcagcggaaaagtggtatttggcagtgtgcagtccgta
gcgcgtaacctgccgctgttcgacggcgagttctcattgctgatcgtggatgaatgtcac
cgaatcagcgacagcgacgatagccagtaccagcaaattcttcagcatttgcgcagtaac
aatcccaatctgcgtttgctcggccttacggccacgccctatcgtcttggcaaaggttgg
atctatcagtatcactatcacggcattacgcgcggcgacagcaacagcctttttcgcgac
tgcatttacgaattaccgctgcgttatatgatcaaaaaccaatttctggttccgccagaa
agattggacatgccggtagtgcagtacgatttcagtcgtctggaacccaacagcaacgga
ttatttcgtgaaaccgatctcaaccgtgagctaaaggatcagcagcggatcacgccgcat
atcgtcagtcaaattatggaatttgccgacacgcgcaaaggcgtgatgatttttgcctct
accgttgaacatgcgcgtgaaatccacggtcttttgcctcctgaacaggcagcgctggtg
agcgcagaaaccccgggcgatgagcgtgacgccattatcaacgcgtttaagcggcaggag
ttgctttatctggtgaacgtcgcggtgcttaccaccggatttgatgcgccccacgtcgat
ttgatcgccattttacgaccaacggaatccatcagcctttaccaacagattgtcggtcgt
ggtctgcgtctatcaccggggaaaacagactgtctgatcctcgattatgccggtaaccca
cacgatctgtttacaccagaagtgggaaccaccaaaccccatagcgatagccaaccggta
caggttttttgccctggatgcggttttgccaatacgttttgggggaaaacgacggaaaac
ggcgacattattgagcactatggccgccgctgtcagggatggctggaggacgatgaaggt
gggcgtgaacaatgtgactaccgttttcgcttcaaaacctgcccacactgtggagcagaa
aacgacatcgctgctcgacgctgccatcagtgtcatcaggtattagtcgatcccgatgat
atgctaaaagaagccctcaagctaaaagatgccttagtgctacgctgtggtggaatgcag
cttcagcacggagaagatgacaaaggtgagtggctgtcgatcacctattacgacgaagat
ggtgctgacgtcagtgaacggtttcgcttaaaaactcccgctcagcgtaccgcctttatg
cagttatttttacgtccgcaccttcgcgcccccggtatagagctggtttggaagcgtgct
gcggatattgtggctcagcaagagaaacttcgttaccccgattttgtggtcgcccgcatg
aaaggacggttttggcaaataagagaaaaagttttcgattatcaggggcgttatcgcaaa
gctgattcgctacgcggctag
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