KEGG   Hafnia paralvei: AL518_12210
Entry
AL518_12210       CDS       T05667                                 
Name
(GenBank) ATP-dependent helicase
  KO
K19789  DNA repair protein RadD
Organism
hpar  Hafnia paralvei
Brite
KEGG Orthology (KO) [BR:hpar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hpar03400]
    AL518_12210
DNA repair and recombination proteins [BR:hpar03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     AL518_12210
SSDB
Motif
Pfam: ResIII Helicase_C DEAD SWI2_SNF2 zinc_ribbon_2 zf-tcix AAA_30 AAA_22 DZR AAA_16 SLFN-g3_helicase AAA UPF0547
Other DBs
NCBI-ProteinID: AMH18705
LinkDB
Position
complement(2774378..2776138)
AA seq 586 aa
MAFTLRPYQREAVDATIAHFRKHQEPAVIVLPTGAGKSLVIAELAKLARGRVLVLAHVKE
LVAQNHSKYCAYGLDADIFSAGLQQKESSGKVVFGSVQSVARNLPLFDGEFSLLIVDECH
RISDSDDSQYQQILQHLRSNNPNLRLLGLTATPYRLGKGWIYQYHYHGITRGDSNSLFRD
CIYELPLRYMIKNQFLVPPERLDMPVVQYDFSRLEPNSNGLFRETDLNRELKDQQRITPH
IVSQIMEFADTRKGVMIFASTVEHAREIHGLLPPEQAALVSAETPGDERDAIINAFKRQE
LLYLVNVAVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLSPGKTDCLILDYAGNP
HDLFTPEVGTTKPHSDSQPVQVFCPGCGFANTFWGKTTENGDIIEHYGRRCQGWLEDDEG
GREQCDYRFRFKTCPHCGAENDIAARRCHQCHQVLVDPDDMLKEALKLKDALVLRCGGMQ
LQHGEDDKGEWLSITYYDEDGADVSERFRLKTPAQRTAFMQLFLRPHLRAPGIELVWKRA
ADIVAQQEKLRYPDFVVARMKGRFWQIREKVFDYQGRYRKADSLRG
NT seq 1761 nt   +upstreamnt  +downstreamnt
atggcctttactcttcgcccttaccaacgtgaggcggtggacgcaaccatcgcacacttc
agaaaacaccaagaacctgcggttattgtgttacctaccggcgcgggtaaaagtttggtc
attgccgagctggcaaagctggcccgcggccgcgttctggttctcgcccacgtaaaagag
ttggtggcgcaaaaccacagtaaatactgtgcttatggtctggatgccgatattttttcc
gccggtttgcaacagaaagagagcagcggaaaagtggtatttggcagtgtgcagtccgta
gcgcgtaacctgccgctgttcgacggcgagttctcattgctgatcgtggatgaatgtcac
cgaatcagcgacagcgacgatagccagtaccagcaaattcttcagcatttgcgcagtaac
aatcccaatctgcgtttgctcggccttacggccacgccctatcgtcttggcaaaggttgg
atctatcagtatcactatcacggcattacgcgcggcgacagcaacagcctttttcgcgac
tgcatttacgaattaccgctgcgttatatgatcaaaaaccaatttctggttccgccagaa
agattggacatgccggtagtgcagtacgatttcagtcgtctggaacccaacagcaacgga
ttatttcgtgaaaccgatctcaaccgtgagctaaaggatcagcagcggatcacgccgcat
atcgtcagtcaaattatggaatttgccgacacgcgcaaaggcgtgatgatttttgcctct
accgttgaacatgcgcgtgaaatccacggtcttttgcctcctgaacaggcagcgctggtg
agcgcagaaaccccgggcgatgagcgtgacgccattatcaacgcgtttaagcggcaggag
ttgctttatctggtgaacgtcgcggtgcttaccaccggatttgatgcgccccacgtcgat
ttgatcgccattttacgaccaacggaatccatcagcctttaccaacagattgtcggtcgt
ggtctgcgtctatcaccggggaaaacagactgtctgatcctcgattatgccggtaaccca
cacgatctgtttacaccagaagtgggaaccaccaaaccccatagcgatagccaaccggta
caggttttttgccctggatgcggttttgccaatacgttttgggggaaaacgacggaaaac
ggcgacattattgagcactatggccgccgctgtcagggatggctggaggacgatgaaggt
gggcgtgaacaatgtgactaccgttttcgcttcaaaacctgcccacactgtggagcagaa
aacgacatcgctgctcgacgctgccatcagtgtcatcaggtattagtcgatcccgatgat
atgctaaaagaagccctcaagctaaaagatgccttagtgctacgctgtggtggaatgcag
cttcagcacggagaagatgacaaaggtgagtggctgtcgatcacctattacgacgaagat
ggtgctgacgtcagtgaacggtttcgcttaaaaactcccgctcagcgtaccgcctttatg
cagttatttttacgtccgcaccttcgcgcccccggtatagagctggtttggaagcgtgct
gcggatattgtggctcagcaagagaaacttcgttaccccgattttgtggtcgcccgcatg
aaaggacggttttggcaaataagagaaaaagttttcgattatcaggggcgttatcgcaaa
gctgattcgctacgcggctag

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