KEGG   Halosimplex pelagicum: HZS54_20915
Entry
HZS54_20915       CDS       T06697                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hpel  Halosimplex pelagicum
Pathway
hpel03030  DNA replication
hpel03410  Base excision repair
hpel03420  Nucleotide excision repair
hpel03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hpel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HZS54_20915
   03410 Base excision repair
    HZS54_20915
   03420 Nucleotide excision repair
    HZS54_20915
   03430 Mismatch repair
    HZS54_20915
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpel03032]
    HZS54_20915
   03400 DNA repair and recombination proteins [BR:hpel03400]
    HZS54_20915
Enzymes [BR:hpel01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     HZS54_20915
    6.5.1.6  DNA ligase (ATP or NAD+)
     HZS54_20915
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     HZS54_20915
DNA replication proteins [BR:hpel03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HZS54_20915
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     HZS54_20915
DNA repair and recombination proteins [BR:hpel03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HZS54_20915
   NER (nucleotide excision repair)
    Other NER factors
     HZS54_20915
   MMR (mismatch excision repair)
    Other MMR factors
     HZS54_20915
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-ProteinID: QLH83942
UniProt: A0A7D5PD91
LinkDB
Position
complement(4195719..4197452)
AA seq 577 aa
MELAAFAERARAIEAESADTDVRERVTDLLGAAGADLPVVARYVQGRVFPAHDSTKLDIG
PALCYEAIAKAAGRNVTVDDVEERVADVGDVGEVASGYDFGGQRGLAAFGAGAGAGGETG
GDGSGAGGTGGLTVAEVDDELRDLAATEGSGSRDTKRDILFGLFNRTGDDEARYLARLVL
SEMRIGVGDGAVRDAIADAFDVPVDEVERALQVTNDHGEVAVVARDEGLDGLESLGLEVG
RPVGAMLAQAGTVTEALDDWEAAAVEWKFDGARVQVHHDPDGIGDGGEGPRTRLFSRNME
DVTDPLPEVVEFVEGALDTPAILDGEVVAVADDGSPLPFQEVLRRFRRKHDVAKAREDTS
VEFRAFDCLHADGDDLLDDPLTERHDRLESALGEAGAAALSALTVSDDPDEIAAIEAEAL
DAGHEGIMLKNPGSAYTPGRRGKQWLKRKPDVETLDLVVTGAEWGEGRRAELLGTFEISA
RTDDGFAPLGKVATGITDEELEDLTDLLEPHVLSEDGADVDVDPAVVFEVGYEEIQASPT
YAAGYALRFPRFLGVRDDIDPDDTDSLERVERLAERQ
NT seq 1734 nt   +upstreamnt  +downstreamnt
atggagctggccgccttcgccgagcgcgcccgggcgatcgaagccgagagcgccgacacc
gacgtgcgcgagcgcgtgaccgacctgctgggtgcggcgggcgcggacctgcccgtcgtc
gcccgctacgtccagggacgggtgttcccggcccacgactcgacgaagctcgatatcggg
ccggcgctgtgctacgaggccatcgcgaaggcggccggccggaacgtcaccgtcgacgac
gtggaagagcgggtcgccgacgtgggcgacgtgggcgaggtcgcctccggctacgacttc
ggcggccagcgggggctggccgcgttcggcgcgggcgccggagcgggcggcgagacaggc
ggtgacgggagtggtgcaggcggaaccggcggcctcaccgtcgccgaggtcgacgacgaa
ctgcgcgacctcgccgcgaccgagggctcgggcagccgcgacaccaagcgggacatcctg
ttcgggctgttcaaccggacgggggacgacgaggcgcggtatctcgcccggctcgtcctc
tcggagatgcgcatcggcgtcggcgacggggccgtcagggacgcgatcgccgacgcgttc
gacgtgcccgtcgacgaggtcgagcgggcgctgcaggtcaccaacgaccacggcgaggtg
gcggtcgtcgcccgcgacgaggggctcgacggcctcgaatcgctcggcctcgaagtcggc
cggccggtcggcgcgatgctcgcccaggccggcaccgtcaccgaggcgctcgacgactgg
gaggcggccgccgtggagtggaagttcgacggcgcgagggtgcaggtgcatcacgacccc
gacgggatcggcgacgggggcgaaggccctcggacccgcctgttctcccggaacatggag
gacgtgaccgacccgctcccggaggtcgtcgagttcgtcgagggcgccctcgacaccccc
gccatcctcgacggcgaggtcgtggcggtcgccgacgacgggtcgccgctgccgttccag
gaggtcctgcggcggttccgccggaaacacgacgtggcgaaggctcgcgaggacacctcc
gtcgagttccgggcgttcgactgcctccacgccgacggggacgacctgctcgacgacccg
ctgaccgagcgccacgaccgcctcgaatcggccctcggcgaagccggcgccgcggcgctg
tcggcactcaccgtctccgacgaccccgacgagatcgccgccatcgaggccgaggcgctg
gacgccggccacgaggggatcatgctgaaaaaccccgggtcggcgtacacgccgggccgg
cgcggcaagcagtggctcaagcgcaagcccgacgtggagacgctggacctggtcgtgacg
ggtgcggagtggggcgagggacgtcgggccgaactgctcgggaccttcgagatctcggcg
cggaccgacgatgggttcgccccgctcggcaaggtcgcgaccggtatcaccgacgaggaa
ctcgaagacctgacggacctgctcgaaccccacgtcctgagcgaggacggcgccgacgtg
gacgtcgaccccgccgtcgtcttcgaagtcggctacgaggagatccaggcctcgcccacc
tacgccgcgggctacgccctgcggttcccgcggtttctgggcgttcgcgacgacatcgac
cccgacgacaccgactcgctggagcgggtcgagcggctggccgagcggcagtag

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