KEGG   Helicobacter pylori 908: hp908_0972
Entry
hp908_0972        CDS       T01893                                 
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
hpi  Helicobacter pylori 908
Brite
KEGG Orthology (KO) [BR:hpi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hpi03009]
    hp908_0972
Enzymes [BR:hpi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     hp908_0972
Ribosome biogenesis [BR:hpi03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    hp908_0972
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: ADN80098
LinkDB
Position
complement(952145..952873)
AA seq 242 aa
MEKAYKLLSVQENISHKKAKALIDSGLVSIGGQKLMVARKELPKNTRFSVQKVEKPSVIF
EDENILALFKPPFIESYDLVSFFKDWALLHRLDKETSGVILLVKENSEFHLKAKKAFKDR
AVKKEYLAIVQGIIEEEREINAPILTIKTTKAFSKISKKGQEAITIITPLKIINKKTLLK
VGIKTGRTHQIRVHLKHINHPIIGDTLYNNEPGSAKRLMLHAHKIALLGYEFEAIAPKEF
EI
NT seq 729 nt   +upstreamnt  +downstreamnt
atggaaaaagcttacaaattattgagcgttcaagaaaacatttcgcataaaaaagctaaa
gctttgatcgattcagggttagtgagcataggggggcagaaattgatggtcgccagaaag
gaattgcccaaaaacacgcgctttagcgtccaaaaagttgaaaaacccagcgtgattttt
gaagatgaaaacattctagccctttttaaacccccttttatagagagctatgatttagtt
tcttttttcaaggattgggcgctgttgcaccgcttggataaagaaacaagcggggtgatt
ttattggtgaaagaaaattcagaattccatttaaaagctaaaaaggcttttaaagacagg
gcggttaaaaaagagtatttagcgatcgttcaaggcatcatagaagaagagcgagaaatc
aacgcccccattcttaccattaaaaccactaaagctttcagtaaaatctctaaaaaaggg
caagaagcgatcacaatcatcacgcccttaaaaatcatcaacaaaaaaacccttttaaaa
gtggggatcaaaaccggaaggacccaccaaatcagagtccatttaaagcacatcaaccac
cccattataggcgatacgctctataataatgagccaggttcagccaaacgcttgatgctc
catgcgcataaaatcgcgctgttagggtatgaatttgaagcgatcgctcctaaagaattt
gaaatttaa

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