Haemophilus pittmaniae: NCTC13334_01422
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Entry
NCTC13334_01422 CDS
T06001
Symbol
uvrB
Name
(GenBank) excinulease of nucleotide excision repair, DNA damage recognition component
KO
K03702
excinuclease ABC subunit B
Organism
hpit
Haemophilus pittmaniae
Pathway
hpit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hpit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC13334_01422 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpit03400
]
NCTC13334_01422 (uvrB)
DNA repair and recombination proteins [BR:
hpit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC13334_01422 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC13334_01422 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
UvrD-helicase
AAA_30
AAA_22
Kinesin
Motif
Other DBs
NCBI-ProteinID:
SNV81626
LinkDB
All DBs
Position
1:1439529..1441568
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AA seq
679 aa
AA seq
DB search
MSEKINSKPFILHSEFQPSGDQPQAIAKLVENLSDGLAHQTLLGVTGSGKTFTIANVIAT
LNRPAMLLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDAAV
NDQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDPDSYLKMMLHLQTGAIINQRQILAQ
LAELQYTRNDQAFQRGTFRVRGEVIDIFPAESDDQAVRIELFDDEIERLSLFDPLTGRNF
GNVPRFTVYPKTHYVTPRERILDTIEKVKVELAQRREYFIKEHKLLEEQRITQRTQFDIE
MMNELGYCSGIENYSRYLSGRNEGEPPPTLFDYMPSDAILIIDESHVTVPQIGGMYRGDR
SRKETLVEYGFRLPSALDNRPLRFEEFERLAPQTIYVSATPGPYELDHSGQEIIDQVVRP
TGLLDPLIEVRPVAIQVDDLLSEARLRAAQNERVLVTTLTKKMAEDLTDYLAEHGVRVRY
LHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSL
IQTIGRAARNLHGKAILYADSITKSMEKAIGETNRRREKQMKYNEEHGIVPQALNKKVGE
LLDIGQGANHKAKGKSRAKVVAEPQANYALPQTAKEYQQRIKKLEQQMYKAAQDLEFEQA
AALRDELHQLREQFMALGD
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaaattaatagcaaaccttttattctccattcggaatttcaaccttccggt
gatcagccacaagctattgctaagttagttgaaaatcttagcgatggtttagcccatcaa
acgttacttggggtaacgggctcgggtaaaacttttactatcgccaatgtgattgccacc
ttaaatcgtccagccatgttattggcgccgaataaaaccttagctgcgcagttatatgcg
gaaatgaaggcttttttcccggaaaatgcagtggaatatttcgtttcttactatgattat
taccagccggaagcctacgtgccatcgagcgatacttttattgagaaggatgctgcggta
aatgatcaaattgaacaaatgcggctttctgccacgaaatcctttcttgaacgacgcgat
accattgtagtggcatcggtttccgcaatttatggattgggggatccggattcttatctg
aaaatgatgttgcacctgcaaaccggagcgatcatcaatcaacggcagattttggcgcaa
ttggctgaattacaatacacccgcaacgatcaggcttttcaacgaggtactttccgtgtg
cgtggtgaagtgatcgatattttccccgctgagtcagatgatcaggcagtacggattgaa
ttgtttgacgatgaaatcgagcgattaagtctttttgatccgttgaccggccgtaacttc
ggtaatgtccctcgtttcaccgtctatccgaaaacccactatgtcacaccgcgcgaacgg
attttagataccattgaaaaggtaaaggtcgagttagcacagcgccgcgaatatttcatc
aaagaacataaattgctggaagagcaacgaattacccaacgtactcaatttgatatcgaa
atgatgaatgaattgggttattgctcagggattgaaaactattcccgctatctttctgga
cgcaatgaaggcgaaccaccgccgactttgtttgactatatgccgtccgatgcgattttg
atcattgacgaatcccatgtcaccgtaccgcaaatcggtgggatgtatcgtggcgaccgt
tctcgcaaagaaaccttggtggaatatggcttccgtttaccatcggctttggataatcgt
ccgttgcgttttgaagagtttgagcgtttggcgccacaaaccatttatgtttctgcaaca
ccagggccttatgaattggatcattcaggacaagaaattattgatcaggtggtgcgtcca
accggattgttggatccattgattgaagtgcgtccggtggcgattcaggtggatgattta
ttatccgaagcacgtttacgggcggctcaaaatgaacgcgtattagttaccacgttaact
aaaaaaatggcagaggatctgaccgattatctggccgaacatggcgtgcgtgtgcgttat
ttgcattccgatatcgatacggtggaacgggtggaaatcattcgggatttacgtttgggt
gagtttgatgtgttggtcggtatcaacttattgcgtgaggggctggatattcccgaagtt
tccctggtcgccattttagatgccgataaagaaggtttcctacgttccgaacgttcatta
attcaaaccattggacgggcggcacggaatttgcacggtaaagcgattttgtatgcagac
agcattaccaaatccatggaaaaagccatcggcgaaaccaaccgtcgtcgtgaaaaacaa
atgaagtacaacgaagagcatggcattgtgccgcaagccttgaataaaaaggtgggcgag
ttactggatatcggccaaggtgctaatcataaagccaagggcaaatctcgtgctaaggtt
gtggctgaaccgcaggccaattatgcattgccacaaacggccaaggaatatcagcaacgg
atcaaaaaattggagcaacagatgtacaaagccgctcaggatttggaattcgaacaggct
gcagcgctacgcgacgaattgcatcaattgcgcgagcaatttatggccttgggtgattaa
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