Helicobacter pylori 2017: hp2017_0741
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Entry
hp2017_0741 CDS
T01913
Name
(GenBank) Phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hpq
Helicobacter pylori 2017
Pathway
hpq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
hp2017_0741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpq03019
]
hp2017_0741
Messenger RNA biogenesis [BR:
hpq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
hp2017_0741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
KH_1
HDOD
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
ADZ49842
LinkDB
All DBs
Position
complement(754671..756182)
Genome browser
AA seq
503 aa
AA seq
DB search
MKKIYYARGQAILKGASAKAKLMEFQAKSFVEAEEMRMKSQECKLQQQYENKNLQLQTHF
DKKEAHLKHLEAQHKEFVRDEKRYLEKEKKELEKERQILEQEKENFKKQCAIYKEAQAKA
LDTMLNYMAYTKDEIKSMILEQLEEELEAQKSALIRRYEKEAKEEGKKKSYAILAEATAR
FAGDYATENLTSRIALPCSDYVGRVIGKDGKNIEAFKKISGVDIEFSEDSSELCLSSFNI
YRREVASETLKILIEDGRIQPNRIEEVYHRVARNMEKELLFEGESVVLELELGAMEDELK
ILIGKMRYRSSFGQNALQHSKEVALLAGLIAEQLGGDKKLARRAGILHDIGKALTQELGR
DHVNLGVEVCKRHKEDPVVINAIYAHHGHEEIMSVECASVCAADALSAGRPGARRKSDEE
YTKRMQALEEIALEFDGVEKAYAMESGRELRVIVKSNQVRDNQVPIIARKIAKRIEESAQ
YVGEVGVQVVRENRFKTTATLKQ
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatctattacgctagagggcaagccattttaaaaggcgcttcagccaaagcc
aaattaatggaatttcaagcgaaatctttcgtggaagctgaagaaatgcgcatgaaaagc
caagaatgcaaattgcaacagcaatatgaaaataagaatttgcagctccaaacccatttt
gataaaaaagaagcgcatttgaagcatttagaagcgcagcacaaagaatttgtaagagat
gaaaaacgctatttggaaaaggaaaaaaaagagcttgaaaaagaacgccaaattttagaa
caagagaaggaaaattttaaaaaacagtgcgctatttacaaagaagctcaagccaaagcg
ctagacacgatgcttaattacatggcttacaccaaagatgaaattaaaagcatgatctta
gagcaattagaagaggaactagaagcccaaaaaagtgcgttaatcaggcgttatgaaaaa
gaagccaaagaagagggtaagaaaaaatcgtatgccattttagcggaagcgacagcccgt
tttgcgggcgattatgcgacagagaatttaacaagccgtatcgctttgccttgctcagat
tatgtgggtcgtgtgataggcaaagacgggaaaaacattgaagcgtttaaaaagattagt
ggggtggatatagaatttagcgaagacagtagtgaattgtgcttgtccagtttcaatatt
tatcggcgtgaagtggcgagcgagacacttaagattttaatagaagacggccgtatccag
cctaacaggattgaagaggtttatcacagagtcgcgcgcaacatggaaaaagaactgctt
tttgaaggggagagcgtggtgctagaattagagcttggggctatggaagatgagcttaaa
attttaataggcaaaatgcgttaccgctctagttttgggcaaaacgccttacagcattct
aaagaagtcgctcttttagccggcttgattgcagaacagcttgggggggataaaaagctt
gctagaagagcgggtattttgcatgatattggtaaagcgctcacccaagagcttgggaga
gaccatgtgaatttaggcgttgaggtgtgcaagcgccataaagaagacccggtcgtgatc
aatgcgatttatgcccaccatgggcatgaagagatcatgagcgtggagtgcgcgagcgtg
tgcgcggctgatgcgctttcagcagggcgtcctggagctaggagaaagagcgatgaagaa
tacactaaacgcatgcaagctttagaagagatcgcactagaatttgatggggtggaaaag
gcgtatgcgatggagagcgggcgagaactaagagtgattgtcaaatccaaccaagtcagg
gacaatcaagtgcctattattgccagaaagatcgctaaaaggatagaagagagtgctcag
tatgtgggcgaagtgggcgtgcaagtggtgcgagaaaatcgtttcaaaacgaccgctacg
ctcaagcaataa
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