Halomonas profundus: LMS44_06290
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Entry
LMS44_06290 CDS
T08361
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
hpro
Halomonas profundus
Pathway
hpro01501
beta-Lactam resistance
hpro01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LMS44_06290
01503 Cationic antimicrobial peptide (CAMP) resistance
LMS44_06290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpro02000
]
LMS44_06290
01504 Antimicrobial resistance genes [BR:
hpro01504
]
LMS44_06290
Transporters [BR:
hpro02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LMS44_06290
Antimicrobial resistance genes [BR:
hpro01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LMS44_06290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
UEQ05476
LinkDB
All DBs
Position
1376405..1379593
Genome browser
AA seq
1062 aa
AA seq
DB search
MNFSNFFISRPIFATVLAIIVTLVGVMSMRILPIEQYPSVVPPTVSVQAQFPGADAETVA
QTVAAPIAEAINGVENMLYMTSNSADNGLMSLSVAFDIGTDGDINTINVNNRVQGALSQL
PEAVQSQGVTVELRSDSILMFIALTSPDGDYDNIYMQNYATLNVLDELRQVPGVGNAEVL
GGGEFAMRIWMDPDKLAQYDLTPSEVASAIRAQNTEVPAGNLASTPQSEPRAYTYTITAG
GRLNNVDDFRNIYLRTNNDGSSLHLEDVARIELGASFYGVDARLNGSTMTPIIINQQPGA
NALETAQGVRDTMEELAGRFPPGLEYVAPYDTTLFIDASVETVLHTFIEAFLIVIVILFI
FLQNWRFTVIAMSVVPVAVVGTFAGFYMFGFSINLLTLFALVLSIGIVVDDAILVVENVE
RVLSEEDDISVRDATIRAMKEVGGPVIATSLIMAAVFVPVAFLGGFTGQIYQQFAITVAI
SVAISALMALTFTPALSAIFIKHKIAGAGQSKFKRALNTPLRLFDRLFAGITAAYMWVVK
GLVRFWVLALALTVATGVGSYWLYANTPSTLVPETDQGVVLVSVSLPDAASLDRTQRYMS
KLSAAIEDIPGVEYSSAVAGYDILSSSVNTARGVMFINLSPWSERDLTATELVGRIMGLG
ASIDGGSAMAFNLPPIMGLSTTGGFTGYLQSFDGASARELYEASLQIMQKANQHPALNRV
FTTFNVNVPSYRANIDQQKALSYGVALENINSALGNTFGNGFVNYFSYQNRNFQVYLQNE
DEFRKTPEDVSSVYVRGGNGERIPLSEFVELERQTGPSVVSRFGVYAGAMFQGEPAAGYS
SAQAIEAMNEVVEEALGSNWGMGWTGTAYQESNMGSAATLAIVFGLLMVFLILAAQYESW
SLPLAVLTATPFAFLGGIGGIALRGLDTSVYVQIGMLVVVGLAAKNAILIVEFAELQRKE
QGKSIREAAITAAELRFRPIVMTSLAFIFGTLPLALATGASDVSSHHIGTTVAMGMFSVA
TLGSLFIPSFYAMIATVSDWLGRKMKGNRHDSSQSALEHDKA
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctctaacttcttcatcagccgcccgatatttgccacggtattggcgattatc
gtgacgttggtgggcgtgatgtccatgcgtattctaccgattgagcagtatcccagcgtg
gtgccgccgacggtatcggtgcaagcgcagttccctggggcggacgctgaaaccgttgcg
caaacggtggcggctcccatcgccgaagccattaacggcgttgagaacatgctttatatg
acctccaacagcgccgataacggcctcatgagcttgagcgtggcgtttgacatcggcacc
gacggcgacattaacaccatcaacgtcaacaaccgggttcagggagcgctttcccagtta
cctgaggccgtgcagtcacaaggtgtcaccgtagagctgcgctctgactcgattttgatg
tttatcgcgttgacctctcctgatggcgactacgacaacatctatatgcagaactacgcc
acccttaacgtgcttgatgaactgcgccaggtgccgggtgtgggtaatgccgaggtgttg
ggcggcggcgagtttgccatgcgtatctggatggatccggataagttggcccagtacgac
ctgacgcccagtgaagtggccagcgcgattagggcacaaaatactgaagtgcctgcgggc
aatttggcatcgacgccgcaaagtgagccgcgtgcgtacacctatacgattaccgctggc
ggccgccttaataatgtcgacgacttccgtaatatttacctacgcaccaataacgacggc
tcttcgctacacttggaagacgtcgcgcgtattgaacttggggcatctttttacggggtt
gatgcgcgtttgaacggctcaaccatgacgccgattattattaaccagcagcccggtgct
aacgcgctggaaactgcgcagggtgtgcgggatacgatggaggaactggccggtcgcttc
ccgcccgggcttgaatatgttgccccttatgatacgaccctgtttattgatgcctccgtg
gaaacggtgctccacacctttattgaagcctttctgatcgttatcgtcattctgtttatt
ttcctgcagaactggcgtttcactgtgattgccatgtcggtggtgccggttgcggtcgtg
ggcacctttgcaggcttctacatgtttggtttttcgatcaacttgctgacgctattcgcc
ttggtgctatcgatagggatagtggtcgacgatgccattcttgtagtggaaaacgtcgag
cgcgtgctgagtgaagaggacgatatcagtgtacgcgacgcgactattcgggcgatgaaa
gaagtcggcgggccggtgattgcgacctcgttgatcatggcggccgtgtttgtacctgtg
gctttcctgggcggctttaccgggcagatttaccagcagtttgcaattaccgtggcgatc
tcggtggccatttcggcgttaatggcgctaacctttacccctgctctgtcagcgattttt
atcaagcacaaaatcgccggtgccgggcagtccaaattcaagcgcgcactaaatacaccg
ctacgcctgtttgaccgactgtttgcggggatcaccgctgcctatatgtgggtcgtaaaa
ggcttggtacggttttgggtattggcattagcgctcacggtagcgacaggggttggttcc
tactggctctacgccaatacgccttcaacactggtgccggaaaccgaccagggggttgtg
ctggtcagcgtgtcgcttcctgacgccgcgtcgctggatcgcacccagcgctatatgtca
aaactcagtgcagcgattgaagatattcccggtgtggaatattcctccgcggtggcgggc
tatgacattttgtcgagttccgtgaataccgctcggggggtaatgtttatcaatctaagc
ccttggtctgagcgtgatttgactgccaccgaacttgtagggcgcattatggggttgggc
gccagtattgatggtggttccgcgatggcctttaacttgccacctatcatggggctttcg
accaccggtgggtttaccggctacttgcagtcctttgatggtgcatcggcacgtgagctg
tatgaagcatcgctgcaaatcatgcagaaagctaaccagcatcctgccttgaaccgggta
tttacaacgttcaacgttaatgtcccgtcttatcgtgccaacattgatcagcaaaaagca
ttaagttacggcgtggcgctggagaacattaactcggctctgggtaatacctttggtaac
ggctttgtgaactacttcagctatcaaaaccgtaattttcaggtctatctacaaaacgaa
gatgaattccggaagacgccggaagacgtcagcagcgtttacgtgcgtggcggaaatggc
gaacgtattccgctctctgaatttgtcgagcttgagcgccaaaccggtccgtcggtagtg
tcccgtttcggcgtttatgccggtgcaatgttccagggtgagccagctgctggttatagc
tcagctcaggcgatcgaagcaatgaacgaagtcgtggaggaagcgctgggcagcaactgg
ggcatgggctggacgggtaccgcataccaagagtccaatatgggcagcgccgcgacgcta
gcgattgtcttcggcctattgatggtcttcctgatcctggcggctcagtatgagagttgg
tctttaccgctagcggtattgactgcaacgccttttgctttcctggggggtattgggggt
atcgcgttgcgcgggctggacaccagtgtgtatgtgcagatcggcatgttggtggtggtc
gggcttgcggcgaagaatgccatcctgattgtcgaattcgccgaactgcagcgtaaggag
cagggaaaatcaatccgtgaagcggcgattacagcagcagagctgcgctttcgtcccatc
gtgatgacctccctggcatttatctttggtaccttaccgctcgcattggcgaccggtgcc
agcgacgtgagcagtcatcacattggtaccacggtcgctatgggtatgttctcagttgcc
accttgggcagcctgtttattcccagcttctacgccatgattgcaaccgtttctgattgg
ctaggtcgcaagatgaaagggaataggcatgatagctcacagtcggcacttgagcatgac
aaagcctag
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