Halomonas profundus: LMS44_07520
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Entry
LMS44_07520 CDS
T08361
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
hpro
Halomonas profundus
Pathway
hpro00521
Streptomycin biosynthesis
hpro00523
Polyketide sugar unit biosynthesis
hpro00541
O-Antigen nucleotide sugar biosynthesis
hpro01100
Metabolic pathways
hpro01110
Biosynthesis of secondary metabolites
hpro01250
Biosynthesis of nucleotide sugars
Module
hpro_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LMS44_07520 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LMS44_07520 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LMS44_07520 (rfbC)
Enzymes [BR:
hpro01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LMS44_07520 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Alpha_kinase
Motif
Other DBs
NCBI-ProteinID:
UEQ05705
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All DBs
Position
1666590..1667138
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AA seq
182 aa
AA seq
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MHYEKLAIPDLVLLTPKVFGDERGFFMETFRQNEFETHCGNYQFVQDNHSKSVQGILRGL
HYQYKQPQGKLVRVTQGEVFDVAVDMRKSSPTFGQWVGVTLSEENKQLLWVPPGFAHGFY
VTSGTAEFQYKCTDYYAPGDEVSISWNDPHLAIEWPLVEGKSPQVSDKDADGVPLNEAPQ
FT
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcactacgaaaaactcgccattcccgatctagtcctgctcactcccaaagtatttggc
gacgagcggggcttcttcatggaaacctttcgccaaaacgaatttgaaacccactgtggc
aactaccagttcgttcaggacaaccacagcaagtccgttcaaggtattttgcggggcctg
cactaccaatataagcagccccagggaaagctagtacgcgtcacccaaggcgaagtattc
gatgtcgccgttgatatgcgcaagagttcaccgacgttcggccagtgggtaggggtaacc
ttaagcgaagagaacaagcagttgctgtgggtgccacctgggtttgcccacggcttttac
gtgaccagcggaacagccgagttccagtacaaatgtacggattactacgcgcctggtgac
gaagtgagcattagctggaatgacccccatcttgcgattgagtggccgctagtagagggt
aaatcgccccaggtatcagataaagatgccgatggtgtgccgcttaacgaagccccacaa
tttacataa
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