Halomonas profundus: LMS44_14340
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Entry
LMS44_14340 CDS
T08361
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hpro
Halomonas profundus
Pathway
hpro03030
DNA replication
hpro03430
Mismatch repair
hpro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMS44_14340 (dnaX)
03430 Mismatch repair
LMS44_14340 (dnaX)
03440 Homologous recombination
LMS44_14340 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpro03032
]
LMS44_14340 (dnaX)
03400 DNA repair and recombination proteins [BR:
hpro03400
]
LMS44_14340 (dnaX)
Enzymes [BR:
hpro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMS44_14340 (dnaX)
DNA replication proteins [BR:
hpro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMS44_14340 (dnaX)
DNA repair and recombination proteins [BR:
hpro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMS44_14340 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_14
AAA_18
AAA_30
AAA_19
AAA_2
nSTAND3
Mg_chelatase
AAA_24
AAA_28
TsaE
Rad17
T2SSE
Herpes_Helicase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
UEQ02467
LinkDB
All DBs
Position
complement(3150334..3152304)
Genome browser
AA seq
656 aa
AA seq
DB search
MSYQVLARKWRPRTFHELVGQAHVQRALVNALDQGRLHHAYLFTGTRGVGKTTLARILAK
CLNCTANGRGDEGITSTPCGQCDSCQAIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYA
PTQGRYKVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPPTVLSRCLQFT
LKHMPPERVVEHLTYVLGEEGVAFDESALWLLGKAAEGSMRDAMSLTDQAIAFGQGAVRH
ADVAAMLGTLDHRHILGLAESLADVDVQRLLSEVAELAEQGPDFAAVLDELSSILHRLAV
AQMVPDAVDNSHGDRDAILQLASRFTAEDIQLYYQIGIQGRGDMVHAPDLRSALEMTLLR
MLAFRPQGVPKPPRTPLPLRREPSQSAATETSAQVAETPSPAPQPSPAADAKPEVHSTPG
AQPETPLEPSPEQTASAAEEEPPLQEPPPWAVEADTQASEVEAPQQASEPEAMSESELVT
EPKPVTEPEPASAPAPDSEPQTVEPSTVLAPEAFPESRPDIQSGKLDNAQWLQCFDSLGL
GGLTRNLAGNCLVESDDGTLLTLRLDPSQEAMQAEVHQTRIERALKEQGMPRRIAFYVAE
LSNSLETPRQREERLNKERHAQAVDLLNHDPHVQKLQQAFGAKLIESSVKPANAMR
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttctggcccgtaagtggcggcctcgcacattccacgaactcgtgggc
caggcccatgttcaacgcgccttggtcaatgccctggatcagggccgtctgcaccatgct
tacctgtttacgggtactcgtggtgtgggcaaaaccaccttggcgcgtattcttgccaag
tgtttgaactgcacggctaacgggcgtggtgatgaaggcattacctctacaccgtgtggg
cagtgcgatagctgtcaggcaattgatgaagggcgctttgttgatcttattgaggtcgat
gcggcgtcaagaaccaaagtagaagatacccgggaactgctggacaatgtccagtatgcg
cctacccaagggcgttataaggtgtacctgatcgatgaggtgcacatgctttccaccagc
agtttcaatgcgctgctgaaaacgctggaagagcctccccctcacgttaaatttctgttg
gcgaccaccgatccgcaaaaactgccgccgacggtactttcacgctgtcttcaatttacc
ctcaaacatatgccaccagagcgcgtggtggagcatctcacctatgtgttgggtgaagag
ggcgtcgcttttgatgaaagcgccttgtggctattgggtaaggcggcggaaggctcaatg
cgcgatgccatgagcctcaccgatcaggctattgcgtttggccagggggccgttcgtcat
gcggatgtggccgccatgctgggcaccctggatcatcgccatattcttgggctggcagaa
tctctggccgatgtggatgtacagcgcctgctctccgaagtggccgaattagccgagcaa
ggcccggactttgccgcggtgttggatgagctatcgagcatactgcaccgcttggcagtg
gcgcagatggtgccggatgcagtggataacagccacggtgatcgtgatgctatcctgcag
ctggcaagccgcttcactgctgaagacattcagctctattaccagattggtattcagggg
cgtggggacatggtgcacgctcctgatttgcgcagcgcgttagagatgacgttgctgcgt
atgttggcatttcgccctcagggtgtaccgaaaccgccgcgtaccccgctaccgcttcgc
cgcgagccttctcaatcggcagcgaccgaaacgagtgcccaagtagcagagacgccatca
ccggcgccgcagccctcgccagcagctgatgcaaagccagaagtccattccacaccaggc
gctcagcctgaaacgccattagagccaagccctgagcagacagcgtctgccgctgaagag
gagccgccgctgcaagagccaccgccttgggcagtcgaagcggatacgcaagcgtctgag
gtggaagctccccagcaagcctctgagccagaggctatgtctgaatcagaactcgttact
gagcccaagcctgttactgagccagagccagcctcagcgcctgcacccgattccgagccc
caaacggtggagccctcaacggtgttagcgccagaagcctttccagaaagccggccggac
attcagtctggcaagctggataatgcgcagtggttgcagtgctttgattctcttggcttg
ggcggcttaacccgtaacttggcgggcaactgcctggtcgagagtgacgacggtacgctg
ctgacgctgcgcctcgaccccagccaagaggccatgcaggcggaagtacatcaaacccgc
attgagcgggcgctaaaagagcagggcatgccaaggcgaatagcgttttacgttgccgag
ttgtctaatagccttgagacgccacggcagcgcgaagagcgtcttaataaagagcgtcat
gcccaggcggttgatctactcaatcacgacccccatgtacaaaagttacagcaggcgttt
ggggcaaagctgatagaatccagcgtaaagcctgccaacgctatgcgctaa
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