Helicobacter pylori Aklavik117: HPAKL117_02935
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Entry
HPAKL117_02935 CDS
T02352
Name
(GenBank) recombination and DNA strand exchange inhibitor protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
hpya
Helicobacter pylori Aklavik117
Pathway
hpya03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HPAKL117_02935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpya03400
]
HPAKL117_02935
DNA repair and recombination proteins [BR:
hpya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HPAKL117_02935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smr
MutS_V
AAA_22
AAA_15
AAA_21
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AFX91000
UniProt:
K7Z4L3
LinkDB
All DBs
Position
complement(614275..616548)
Genome browser
AA seq
757 aa
AA seq
DB search
MNPPNEPPMNNNNNTPPKPLEESLDLKEFIALFKTFFAKERDTIILENDLKQTFTYLNEV
DAIGLPTPKSVKESDLIIIKLTKLGTLHLDEIFEIVKRLHYIVILQNTFKTFTHLKFYER
LNAIVLPHFFNDLIVLFDDEGKIKQGANATLDALNESLNRLKKESAKIIHHYARSKELAP
YLVDTQSHLKHGYECLLLKSGFSGAIKGVVLERSANGYFYLLPESAQKIAQKIAQIDNEI
DCCIVGMCQTLSHSLQKHLLFLKFLFKEFDFLDSLQARLNFAKAYNLEFVMPSFTQKKMV
LENFSHPILKEPKPLNLKFEKSMLAVTGVNAGGKTMLLKSLLSAAFLSKHLIAMKINAHH
SIIPYFKEIHAIINDPQNSANNISTFAGRMKQFSALLSKENMLLGVDEIELGTDADEASS
LYKTLLEKLLKQNNQIIITTHHKRLSVLMAENKEVELLAALYDEEKERPTYTFLKGVIGK
SYAFETALRYGVPHFLIEKAKAFYGEDKEKLNVLIENSSALERELKQKNELLENALKEQE
DLKNAWLLEMEKQKETFHNKKLELEKSYQQALNLLKSEVASKDTSSMHKEIHKASEILNK
HKTNQEIPQIITSFQANEKARYKNESVLITQILDKGYYWIETELGMRLKAHGSLLKKIQK
PPKNKFKPPKTTIPKPKEASLRLDLRGQRSEEALDSLDAFLNDALLGGFEEVLICHGKGS
GILEKFVKEFLKNHPKVVSFSDAPINLGGSGVKIVKL
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgaacccccccaatgaacctccaatgaataataataataacaccccaccaaaaccccta
gaagaaagcctggatttaaaagaatttatcgctctttttaaaaccttttttgcaaaagaa
agagatactattattttagaaaacgatctcaagcaaactttcacttatttaaacgaagtg
gatgcgatcgggttgcctacccctaaaagcgtgaaagaaagcgatctcattatcatcaaa
ctcaccaaattagggacgctccatttagatgaaatttttgagattgtcaaacgattgcac
tacattgtcattttacaaaacacttttaaaactttcacgcatttaaaattttatgaacgc
cttaacgctattgtcctgccccatttttttaatgatctaatcgttttatttgacgatgag
ggaaaaatcaaacaaggggctaacgctaccctagacgctttgaatgaaagtttgaaccgc
cttaaaaaagagagcgctaaaatcattcaccattacgcgcgctctaaagagcttgcccct
tatttagtggatacgcaaagccaccttaagcatggttatgaatgccttttattgaaaagc
gggttttctggcgcaattaaaggcgttgtgctagaaaggagcgctaatggttatttctat
cttttgcctgaaagcgcgcaaaaaatcgcgcaaaaaatcgcgcaaattgataatgaaata
gattgctgtattgttggaatgtgtcaaactctaagccatagcttgcaaaaacacctttta
tttttaaaattcctttttaaagaatttgattttttagacagcttgcaagctaggcttaat
ttcgctaaagcctacaatttagaatttgtcatgccaagctttactcaaaaaaaaatggtt
ttagaaaacttttcgcaccccattttaaaagagccaaagcccttaaatttgaagtttgaa
aaatccatgctcgctgttaccggcgtgaatgcgggcgggaaaaccatgctcttaaaatcg
cttttaagcgcggcttttttaagcaagcatctcattgctatgaaaatcaacgcccaccat
tccattatcccctattttaaagaaatccacgccattattaatgacccccaaaacagcgcg
aacaatatctctacttttgccggcagaatgaagcaatttagcgctcttttatccaaagaa
aacatgcttttaggcgttgatgaaattgagctagggactgacgctgatgaagcgagcagt
ttgtataaaaccctgttagaaaaattgcttaaacaaaacaaccaaatcattatcaccacg
caccacaaacgcctgagcgtgttaatggcagaaaacaaggaagtggaattattagccgct
ctttatgatgaagaaaaagaacggcccacttacacttttttaaaaggggttattggcaaa
agctatgcgtttgaaaccgctttgcgctatggcgtgccgcattttttgattgaaaaagcg
aaagccttctatggcgaagataaggaaaaattgaatgttttgattgaaaattccagcgcg
ttagaaagggaattgaagcaaaaaaacgaacttttagagaacgctttaaaagagcaagaa
gatttaaaaaacgcatggcttttggaaatggaaaaacaaaaagaaacctttcacaataaa
aaattggaattggaaaaatcctaccaacaagccctaaatctcttaaaaagcgaagtcgct
tcaaaagataccagctccatgcataaagaaatccataaagcgagcgaaattttaaacaaa
cataaaacaaaccaagagatcccacaaatcataacgagctttcaagccaacgaaaaagcg
cgctataaaaatgaaagcgtgctgattacacaaattttagacaagggctattattggata
gaaaccgagcttggcatgcgtttaaaagcgcatgggagtttgttgaaaaaaatccaaaaa
ccccctaaaaacaaattcaaaccccctaaaacaaccattcctaaacctaaagaagcgagc
ttacgccttgatttaagggggcaacgcagcgaagaagccctagattcactggacgctttt
ttaaacgacgcgcttttagggggctttgaagaagtgcttatttgccatggcaaggggagc
gggattttagaaaagtttgtgaaagaatttttaaaaaaccaccctaaagtggtaagcttt
agcgacgctcccattaatttaggcggtagtggggttaaaatcgttaaattgtag
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