Helicobacter pylori oki102: HPOKI102_05525
Help
Entry
HPOKI102_05525 CDS
T03182
Name
(GenBank) phenylalanyl-tRNA synthetase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
hpyb
Helicobacter pylori oki102
Pathway
hpyb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
hpyb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HPOKI102_05525
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
hpyb01007
]
HPOKI102_05525
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpyb03016
]
HPOKI102_05525
Enzymes [BR:
hpyb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
HPOKI102_05525
Amino acid related enzymes [BR:
hpyb01007
]
Aminoacyl-tRNA synthetase
Class II (U)
HPOKI102_05525
Transfer RNA biogenesis [BR:
hpyb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HPOKI102_05525
Prokaryotic type
HPOKI102_05525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
PhetRS_B1
Motif
Other DBs
NCBI-ProteinID:
AHN35009
LinkDB
All DBs
Position
1122782..1125076
Genome browser
AA seq
764 aa
AA seq
DB search
MKLSINDLNVFVNTPKDIAKLCEDLSRLGLEVESCIPCIAPKNVVVGKVLEKAPHKNAEK
LSVCQVDVGKEVLPIVCGAKNVAPNQFVPVALNGALIGSTTIAKTELRGVESHGMICSSS
ELGFPKINDGILELDESVGELVLGKELNEYAPFNTHVLEISLTPNRGDCLSVLGIAREIS
AFYHTPLKPIKALNFTPKSDLITLSAGENIESHLAYYLICNHSLKTPLNIKLSLAHNNAL
SENDLNNFIEFSAHFSGVIMNAYSLNKTPMDLSVKNDENNLESVYINHQKRSTIAIKHQV
QKDLSECLLLEASYIDPISLSLKLHALKDKTLQKDNALIYRSARGSNPNLSDGLNFLSAH
LKATILESKQTECSLKDRTLTFQLEDITEILGLAVEKEKIQSILKNLGFKVSAKEPNSKP
PILEIVAPNFRNDIKTIQDITEEILRFVGIDNLVSKPLNCVSSKNSNPHYDTHRFFENLK
HKALACGFKEVIHYVFYSKEKQQKLGFEVLEDPLELQNPITTELNTLRTSLVCGLLDASL
RNKNLGFKSIALYEKGSVYNSKREEIQKLGFLVSGLQKKESYPDAKGKAWDFYSFAECVS
KVIGDFSLEKLTTQTPINHPYQSAKIIQNHEIIGVIAKIHPKVIQELDLFESYYAEIDAS
KLKRPTMLLKPFSIYPSSVRDLTLIIDENTAFSRIKKALKDAQIPNLSEILPLDIFKESN
NSIALSLRCVIHSLEKTLNDEEVNSAVQKVLEILEKEFNARLKG
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgagcattaatgatttgaatgtttttgtcaatacgcctaaagatatagccaaa
ctctgtgaggatttgagtcgcttaggtttagaagtggaaagctgtatcccttgtatcgct
cctaaaaatgtggttgtgggtaaggttttagaaaaagccccccataaaaacgccgaaaaa
ctcagcgtgtgtcaagtggatgtgggcaaagaagtgttgccaatcgtgtgtggggctaaa
aatgtcgcgccaaaccaattcgtgccagtcgctttaaatggggcgctaatcggctcaacc
acaatcgctaaaacggagcttaggggggttgaaagccatggcatgatttgctctagtagc
gaattaggcttccctaaaatcaatgatggcatcttggaattagatgagagcgttggggag
ttggttttagggaaagaattaaacgaatacgcccctttcaacacgcatgttttagaaatt
tcattgacccccaatcgtggggattgcttgagcgttttaggcattgctagagaaattagc
gcgttttatcacacgcccctaaagcctattaaggctttaaattttacgccaaaaagcgat
ttgatcacgcttagtgcgggtgaaaatattgaatcgcatctggcttattatttgatttgc
aaccattcattaaaaacccctttaaatatcaaactttcgctcgctcataataacgcctta
agcgagaacgatctaaacaatttcatagaatttagcgcgcattttagtggggtaataatg
aatgcttatagcctgaataaaacccctatggatttgagcgtgaaaaacgatgaaaataac
cttgaaagcgtttatatcaaccatcaaaaacgctccacgatcgctatcaagcatcaagtt
caaaaagatttgagcgagtgtttgcttttagaagcaagttatattgatccgataagcctg
tctttaaaattacatgctctaaaagataaaacgcttcaaaaagacaacgcccttatttat
aggagtgctagggggagtaaccctaatctatcagacggcttgaattttttaagcgctcat
ttgaaagccacgattttagaaagcaaacaaaccgagtgttctttaaaagatcgcaccctt
acattccagcttgaagacattactgaaattttggggcttgctgtagagaaagaaaaaatt
caaagcattttaaaaaatttaggctttaaagtcagtgcaaaagagccaaactcaaaaccc
ccaattttagagattgttgcaccaaatttcaggaatgacattaaaacgatccaagatatt
actgaagaaatcttacgctttgtagggattgataatctagtctcaaagcctcttaattgt
gtcagtagcaaaaattcaaacccccattatgacacgcaccgcttttttgaaaaccttaaa
cacaaggctctcgcttgcggttttaaagaagtcattcattatgtgttttactctaaagaa
aagcagcaaaaactaggctttgaagttttagaagatcctctagaattgcaaaaccctatc
acaacggagttaaacaccctaagaacgagccttgtttgcgggcttttagacgccagctta
aggaataaaaatttagggtttaaaagcatcgccctttatgaaaaagggagcgtgtataac
tctaagagagaagagatccaaaaactaggctttttagtaagcggcttacaaaaaaaagaa
agctaccctgacgctaagggcaaggcgtgggatttttactctttcgctgaatgcgtttca
aaagttataggggattttagcctggaaaaactaaccactcaaacccccattaaccacccc
taccagagcgctaaaatcattcaaaatcatgaaatcataggcgtaatcgctaaaatccac
cctaaagtgatccaggaattggatttgtttgaaagctattatgctgagatagacgcttct
aaactcaaacgccccaccatgctattaaaaccctttagcatttaccctagcagtgtgagg
gatttgactctcatcattgatgaaaacaccgcttttagcaggattaaaaaagccctaaag
gacgctcaaatccctaatttaagcgagattctaccccttgatatttttaaagaaagtaat
aattccatagccttaagcctgcgttgcgtgattcattctttagaaaaaaccctgaatgac
gaagaggtcaattcagccgtgcaaaaagtgcttgaaattttagaaaaagaatttaacgcc
cgccttaagggataa
DBGET
integrated database retrieval system
