Helicobacter pylori OK113: HPOK113_1187
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Entry
HPOK113_1187 CDS
T02510
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
hpyo
Helicobacter pylori OK113
Pathway
hpyo03030
DNA replication
hpyo03430
Mismatch repair
hpyo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPOK113_1187 (holB)
03430 Mismatch repair
HPOK113_1187 (holB)
03440 Homologous recombination
HPOK113_1187 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyo03032
]
HPOK113_1187 (holB)
03400 DNA repair and recombination proteins [BR:
hpyo03400
]
HPOK113_1187 (holB)
Enzymes [BR:
hpyo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPOK113_1187 (holB)
DNA replication proteins [BR:
hpyo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPOK113_1187 (holB)
DNA repair and recombination proteins [BR:
hpyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPOK113_1187 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
EMP24_GP25L
Msg2_C
Motif
Other DBs
NCBI-ProteinID:
BAM97095
LinkDB
All DBs
Position
1272798..1273454
Genome browser
AA seq
218 aa
AA seq
DB search
MKNSNRLIYTDNLEESLEEAASLFEHHIKFYTEIIEKDKKVIKTFNKDFKIEHAKEVLSK
ANLKHSELNAFLIAAPSYGVEAQNALLKILEEPPNNVCFIMFAKSPNHVLATIKSRLIKE
DKRQKIPIKPLDLDLSRLDLKDIYAFLKNLDKENFDSRENQREKIESLLESIHRHQIYLS
EQELQAFDLAIKANSSYYKLSYNLLPLLLSLLSKKKTP
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaactccaaccgtctcatttatacggacaatcttgaagagagcctagaagaggct
gcaagcctttttgaacaccacattaaattctacaccgagattattgaaaaagacaaaaag
gtgatcaaaacttttaacaaggattttaaaatagagcatgccaaagaagtcctatccaaa
gccaatctcaaacacagcgaattaaacgcctttttaatcgccgcgcccagctatggcgta
gaagcccaaaacgcgcttttaaaaatcttagaagaaccccctaataatgtttgttttatc
atgttcgctaaaagcccaaaccatgttttagccaccattaaatcccgcctgatcaaagaa
gacaaacgccaaaaaatccccataaaacctttagatttggatttatcaaggctggatttg
aaagatatttacgcatttttaaaaaatttagacaaagaaaattttgattctagagaaaat
cagagggaaaaaattgaaagcctgttagagagtattcacagacaccaaatctatttgagc
gagcaagaattgcaagcctttgatttagcgatcaaggctaacagctcttattacaagctc
agctataatcttttacccctgcttttaagccttttatccaaaaagaaaacgccatga
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