KEGG   Haloplanus rallus: EI982_01550
Entry
EI982_01550       CDS       T06334                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hra  Haloplanus rallus
Pathway
hra03030  DNA replication
hra03410  Base excision repair
hra03420  Nucleotide excision repair
hra03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EI982_01550
   03410 Base excision repair
    EI982_01550
   03420 Nucleotide excision repair
    EI982_01550
   03430 Mismatch repair
    EI982_01550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hra03032]
    EI982_01550
   03400 DNA repair and recombination proteins [BR:hra03400]
    EI982_01550
Enzymes [BR:hra01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     EI982_01550
    6.5.1.6  DNA ligase (ATP or NAD+)
     EI982_01550
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     EI982_01550
DNA replication proteins [BR:hra03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    EI982_01550
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     EI982_01550
DNA repair and recombination proteins [BR:hra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     EI982_01550
   NER (nucleotide excision repair)
    Other NER factors
     EI982_01550
   MMR (mismatch excision repair)
    Other MMR factors
     EI982_01550
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase EccE
Other DBs
NCBI-ProteinID: QGX93570
UniProt: A0A6B9FBQ7
LinkDB
Position
53765..55426
AA seq 553 aa
MDFADFADRVADVEAETADLEITSLAAGLLADAGDDLSVVVRLLLGRVVPAWDTTTLDVG
PSLCHEALARAAGTNVTADDVADRLAETGDIGAVAESLDTGGQRGLAAFAAADPDPLTVA
DVDDRLRALANADGSGSQDRKVDTLFGLFNRADPLAARYLARLVLSEMRIGVGEGTVRDA
IAEAFDVPVDAVERALQVTNDYGAVAVRARDEGVAGLADVTLTVGRPVRAMLAQTGTVAD
ALDAWGTVAVETKFDGARVQVHHDPDGETAVYSRNMADVTDALPELVEFVEGAVDVPVIL
DGEALAVDDDGNPLPFQAVLRRFRRKHDVARMREEVAVELRAFDCLHADGTDLLDVPLRD
RRDHLESTLPSGRSPLTITDDPDAVADREAEALAADHEGIMLKNPDSAYTPGKRGQNWLK
RKPEVETLDLVVTGAEWGEGRRANHLGTFLLSARDASTDGDDFVTIGKVATGISDERLAA
LSDRLEPLIQRQDGTEVDIDPTVVFEVGYEEIQESPTYGSGYALRFPRFVAVREDKTPAD
ADSLSRIERLADD
NT seq 1662 nt   +upstreamnt  +downstreamnt
atggatttcgccgacttcgccgaccgggtcgccgacgtcgaggccgagacggccgatctg
gagatcacgtcgctggccgcggggttgctggccgacgccggtgacgacctgtccgtcgtc
gtccggctcctgctcggacgggtcgtgcccgcctgggacaccacgaccctcgacgtgggg
ccgagcctctgtcacgaggcgctcgcgcgcgccgccgggacgaacgtcaccgcggacgac
gtggccgaccgactggccgagaccggcgacatcggggccgtcgccgagtcgctcgatacg
ggcggacagcggggcctcgccgcgttcgccgccgccgaccccgaccccctcaccgtcgcc
gacgtcgacgaccgcctgcgggcgctggcgaacgccgacggatcggggagccaggaccgc
aaggtcgacaccctgttcggcctgttcaaccgcgccgacccgctcgcggcccggtacctc
gcccgcctcgtcctctcggagatgcggatcggcgtcggcgaggggacggttcgggacgcc
atcgccgaggcgttcgacgtccccgtcgacgccgtcgagcgcgcgctccaggtgaccaac
gactacggtgcggtggcggttcgcgcccgcgacgagggggtggcggggctggcggacgtg
acgctgaccgtcggccggccggtgcgggcgatgctggcccagaccggcaccgtggccgac
gccctcgacgcgtgggggaccgtcgccgtcgagacgaagttcgacggcgcgcgggtgcag
gtccaccacgaccccgacggggagacggccgtctactcccggaacatggcggacgtgacc
gacgcgctccccgaactcgtggagttcgtcgagggcgcggtcgacgtgccggtcatcctc
gacggcgaggcgctcgccgtcgacgacgacggcaatcccctccccttccaggcggtgctc
cgtcgcttccggcgcaaacacgacgtggcccggatgcgcgaggaggtggccgtcgaactc
cgcgcgttcgactgcctccacgcggacgggacggacctgctcgacgtccccctccgcgac
cgtcgcgaccacctcgaatcgacgctgccgtccggccgctcgccgctcacgatcacggac
gaccccgacgccgtcgcggaccgggaggccgaggcgctggcggcggaccacgagggcatc
atgctgaagaaccccgactcggcgtacacgccgggcaagcgtgggcagaactggctgaag
cgaaagcccgaagtcgagacgctcgatctggtcgtcacgggcgccgagtggggcgagggg
cggcgggcgaaccacctcggcaccttcctcctgtcggcacgggacgcatccaccgacggc
gacgacttcgtcaccatcggcaaggtggcgacgggtatctccgacgagcgactggccgcc
ctgagcgaccggctggagccgctgatccagcggcaggacggaaccgaggtcgacatcgac
ccaaccgtggtcttcgaagtcggctacgaggagattcaggagtcgcccacgtacggctcg
ggctacgcgctccggttcccgcggttcgttgccgtccgcgaggacaagacgcccgcggac
gccgattcgctgtcgcggatcgagcggctggcggacgactga

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