Herbaspirillum rubrisubalbicans: Hrubri_1172
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Entry
Hrubri_1172 CDS
T04238
Name
(GenBank) cation/multidrug efflux pump protein
KO
K18138
multidrug efflux pump
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb01501
beta-Lactam resistance
hrb01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Hrubri_1172
01503 Cationic antimicrobial peptide (CAMP) resistance
Hrubri_1172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrb02000
]
Hrubri_1172
01504 Antimicrobial resistance genes [BR:
hrb01504
]
Hrubri_1172
Transporters [BR:
hrb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Hrubri_1172
Antimicrobial resistance genes [BR:
hrb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Hrubri_1172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
EbsA
Motif
Other DBs
NCBI-ProteinID:
ALU88384
LinkDB
All DBs
Position
1371963..1375112
Genome browser
AA seq
1049 aa
AA seq
DB search
MARFFIDRPIFAWVLAIIVMLAGAISVLTLPIAQYPAIAPPAIAITANYPGASAKTLEDT
VTQVIEQKMKGLDRLSYMASTSESSGTVTITLTFENGTNPDTAQVQVQNKLSLATPLLPT
EVQQQGITVTKSATNFLNVLAFTSEDGSMSGSDLSDYVAANVQDAISRVQGVGDTTLFGS
QYAMRIWLDPNKLNSYALTPLDVKNAIQAQNVQVSSGQLGGLPAVENQQINATITAQTRL
RTADQFRNIVLRTLTGGAQVKLRDVARIELGSESYTSVGRYNGKPAAGLAIKLATGANAL
DTVKAIDARVAQLEKFFPAGMKVQKPYDTTPFVRISIEEVVRTLVEAVVLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFGVLAAFGFTINTLTMFAMVLAIGLLVDDAIVVVENVERVM
SEDGLPPKEATRKSMGQITGALVGVALVLAAVFVPMAFFSGSTGVIYRQFSITIVSAMTL
SVLVAIVLTPALCATLLKPAAKGHALATSGFFGWFNRQFDRGNRRYQGVVRHMLGRGWRY
MAAYAVLLALVVTGFMKLPVGFLPDEDQGSLFAIMQLPAGATKARTDDVIHQVEHHFLVD
QKDAVAGVFSVSGFSFAGSGQNMGFAFIKLKPWDERKGPGLSVTDVVNKAGAAFAKIRDA
KVFAFAPPAVAELGNATGFDLMLKDEANLGHAALMQARNQLLATLTKDKRLVAVRPNGLE
DTPEFRLQVDTEKAGALGVSMSDINDTIATAWGSSYVNDFIDKGRVKKVMLQADAQYRML
PSDLDRWYVRNSAGTMVPFSAFSSAHWTSGSPRLERYNGVPSMEILGMALPGAASSGQAM
DIVEAALAKMPPGIGYEWTGLSLQEKASSGKTGILYSISILIVFLALAALYESWAVPFSV
ILVVPLGVFGALVGAILTWKMNDVYFQVGLLTTIGLACKNAILIVEFAKDLYEHGKNLVE
ATMEAVRMRLRPILMTSMAFILGVLPMVLGSGAGAGAQHALGTAVIGGMLSGTLLAIFFV
PLFFVIIMKLFARKPHAAPQGQPAISTEH
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggctcgctttttcattgaccgccccatcttcgcctgggtgctcgccatcatcgtcatg
ctggccggcgccatctcggtgctgaccctgcccattgcccagtatccggccatcgcgcca
ccggccatcgccatcacggccaactatcccggcgcctccgccaagacgctggaagacacc
gtgacccaggtcatcgaacagaagatgaagggcctggatcgcttgagctatatggcttcc
accagcgaatcttcgggcacggtgaccattacgctgaccttcgagaatggcaccaatccc
gacactgcccaggtgcaggtgcaaaacaagctctcgctggccacgcccctgctgcccacg
gaagtacagcagcagggcatcaccgtgaccaagtcggccaccaacttcctcaatgtgctg
gcctttacctcggaagatggcagcatgagcggatcggacctgtcggattacgtggccgcc
aacgtgcaggatgccatcagccgggtgcaaggcgtaggcgataccacgctcttcggttcg
caatatgcgatgcgcatctggcttgatcccaacaagctcaatagctatgccctcacgccg
ttggacgtgaagaacgccatccaggcgcagaacgtgcaggtgtcgtcgggtcagttgggt
ggtttgccggcggtcgagaatcagcagatcaatgccaccatcaccgctcagactcgcttg
cgcacggccgatcaattccgcaacatcgtgctgcgtacgctcaccggcggcgcgcaggtc
aagctgcgcgacgtggcccgcatcgaactgggtagcgaaagctatacctcggtgggacgc
tacaacggcaagcctgccgccggcctggccatcaagctggccaccggagccaatgcgctc
gacaccgtcaaggctatcgatgcacgcgtggcccagctggaaaaattcttcccggctgga
atgaaggtgcagaagccctatgacaccacgcccttcgtgcgcatctccatcgaagaagtg
gtacgcaccctggtcgaagcggtggtgctggtgttcctggtgatgtacctgttcctgcag
aatttccgcgccaccctcattcccaccatcgccgtgccggtggtgttgctgggtaccttc
ggcgtgctggcggccttcggcttcaccatcaataccttgaccatgtttgccatggtgctg
gccatcggtctgctggtcgatgatgccatcgtggtggtggaaaacgtcgagcgggtgatg
tccgaagatggcttgccgcccaaggaagccacccgcaagtccatgggccagatcaccggc
gcgctggtgggcgtggcgctggtgctggcggcggtgttcgtgccgatggctttcttcagt
ggctccaccggggtgatctatcgccagttttccatcaccatcgtctcggccatgacgttg
tcggtactggtggccatcgtgctcacgccggccctgtgcgcgaccctgctcaagccggcc
gccaaaggccatgcactggccaccagcggtttcttcggctggttcaaccgccagttcgat
cgcggcaatcgccgctaccaaggcgtcgtgcgccacatgctgggccgcggctggcgttat
atggccgcctatgcggtgctgctggcgctggtggtgaccggtttcatgaagctgccggtg
ggcttcctgcccgatgaagaccagggctcgctgtttgccatcatgcagttgcctgccggg
gcgaccaaggcccgtaccgatgacgtgatccaccaggtcgagcatcatttcctggtggac
cagaaggatgcggtggcgggggtgttctcggtctccggtttcagcttcgccggcagtggc
cagaacatgggctttgccttcatcaagctcaagccctgggatgagcgcaaggggccgggc
ttgtcggtgaccgatgtggtcaacaaggccggtgccgcgtttgccaagatccgcgatgcc
aaggtgtttgcctttgcgccgccggccgtagccgagttgggcaatgccaccgggttcgac
ctgatgttgaaggatgaggccaaccttggccacgccgccctcatgcaggcgcgcaaccag
ttgctggcgacgctgacaaaggacaagcggctggtggcggtgcgtcccaacggcctggaa
gacacgcccgaattccgcctgcaggtcgataccgagaaggccggtgcgctcggtgtgtcg
atgtccgacatcaatgacaccatcgctaccgcctggggcagcagctacgtcaatgacttc
atcgacaagggacgggtcaagaaggtgatgctgcaggccgatgcgcaataccgtatgttg
ccctccgacctcgaccgctggtacgtgcgcaatagcgccggcaccatggtccccttcagt
gccttctccagcgcccactggacgtccggttcgccacgactggagcgctacaacggcgtg
ccgtccatggaaatcctgggcatggccttgccgggcgcggcttccagcggccaagccatg
gacatcgtcgaggctgcgctggccaagatgccgccgggcatcggctatgaatggaccggg
ttgtcgctgcaggaaaaggcgtccagcggcaagaccgggatcctctattcgatctcgatc
ctgatcgtgttcctggcgctggcagcactctatgaaagttgggcagtgccgttctcggtg
atcttggtggtgccgttgggggtgtttggcgcgctcgtcggcgctatcctgacctggaag
atgaatgacgtgtacttccaggtggggctgttgaccaccatcggcctggcctgcaagaac
gccatcctgatcgtggaatttgccaaggatctctacgaacacggcaagaacctggtggag
gccaccatggaagcggtgcggatgcgtctgcgtccgatcctgatgacctcgatggccttc
attctcggcgtcttgccgatggtgctgggtagtggcgccggagccggtgcgcagcacgcg
ctgggcacggcggtgatcggcgggatgctctcgggcacgttgctggcgatcttcttcgta
ccgctgttcttcgtgatcatcatgaagctgttcgcccgcaagccacacgccgccccgcaa
ggccaacccgcgatctctacggagcactga
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