Herbaspirillum rubrisubalbicans: Hrubri_1262
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Entry
Hrubri_1262 CDS
T04238
Symbol
tag
Name
(GenBank) DNA-3-methyladenine glycosylase I protein
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Hrubri_1262 (tag)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrb03400
]
Hrubri_1262 (tag)
Enzymes [BR:
hrb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
Hrubri_1262 (tag)
DNA repair and recombination proteins [BR:
hrb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Hrubri_1262 (tag)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
ALU88474
LinkDB
All DBs
Position
1485739..1486308
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AA seq
189 aa
AA seq
DB search
MNPSPIRCGWVNLANPRYVDYHDHEWGVPCHDETRLFEMLNLEGAQAGLSWETVLNKRDS
YREAFDGWDADKIARYDERRVAQLLANPGIVRNRLKVAATIGNARAYLKLCEEVGGLDPY
LWGHVDGQPIVNRWASLADCPAKTPLSDAISKDLARRGFKFVGSTIIYAYLQGVGVINDH
VRDCHCHAG
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatctccgatccgctgcggctgggtcaacctcgccaatcctcgttacgttgac
tatcacgaccatgaatggggcgtgccctgccacgatgagacccgtctgtttgaaatgctg
aacctggaaggcgcccaggccgggctctcatgggaaaccgtactgaacaagcgcgacagt
taccgcgaggctttcgacggctgggacgccgacaagatcgcccgctacgatgagcgccgg
gtggcgcaactgctggccaatcccggcatcgtgcgcaatcgcctcaaggtggcggccacc
atcggcaatgcccgcgcctatctcaagctgtgcgaggaagtgggcgggctcgatccctat
ctgtggggccatgtcgatggccagcccatcgtcaaccgctgggcgtcgttggccgattgc
ccggccaagacgccgctgtcggacgccatttccaaggacctggcccggcgcggcttcaag
ttcgtcggttccaccatcatctacgcctatctgcagggcgtgggcgtgatcaacgaccac
gtgcgcgattgccattgccatgccggctaa
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