Herbaspirillum rubrisubalbicans: Hrubri_4302
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Entry
Hrubri_4302 CDS
T04238
Symbol
rfbC
Name
(GenBank) dTDP-6-deoxy-D-glucose-3,5 epimerase protein
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
hrb
Herbaspirillum rubrisubalbicans
Pathway
hrb00521
Streptomycin biosynthesis
hrb00523
Polyketide sugar unit biosynthesis
hrb00541
O-Antigen nucleotide sugar biosynthesis
hrb01100
Metabolic pathways
hrb01110
Biosynthesis of secondary metabolites
hrb01250
Biosynthesis of nucleotide sugars
Module
hrb_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
hrb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Hrubri_4302 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Hrubri_4302 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Hrubri_4302 (rfbC)
Enzymes [BR:
hrb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
Hrubri_4302 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ALU91448
UniProt:
A0A0U3L6D1
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All DBs
Position
5041380..5041901
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AA seq
173 aa
AA seq
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MLLIEPRVFGDNRGFFYESFNQRSFQEQTAVDVQFVQDNHSRSARGVLRGLHYQIRHPQG
KLVRVVRGAVLDVALDIRRASPTFGQWFSVLLSAENKRQLWIPPGFAHGFSVLEDDTEFL
YKTTDYWMPEHERCILWNDPALAIDWQLQGEPIMSEKDKHGTPFLNAEVFETP
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
gtgctattgatcgaacctcgcgtgttcggggacaaccgcggctttttctacgaaagcttc
aaccaacgcagcttccaagaacagaccgcagtggatgtgcaattcgtccaggacaaccac
tcccgttcagcacgcggcgtactgcgcggactgcactaccagatccgccacccgcaaggc
aagctggtacgcgtggtgagaggtgcggtactggacgtggcactcgacatccgccgtgct
tcgccgaccttcgggcagtggttcagtgtgctattgagtgcggagaacaaacggcaactg
tggatcccgccgggctttgcacatggattttcggtcctggaagacgacaccgagtttctc
tacaagacgactgactactggatgcccgagcacgaacgctgcatcctgtggaacgacccg
gctctggcgatcgactggcaattgcagggcgaaccgatcatgtcggagaaggataaacac
ggcacgcctttcctcaatgctgaggtattcgagacaccatga
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