Haliotis rufescens (red abalone): 124116892
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Entry
124116892 CDS
T07893
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10 isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hrf03009
]
124116892
Enzymes [BR:
hrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124116892
Ribosome biogenesis [BR:
hrf03009
]
Eukaryotic type
90S particles
Helicases
124116892
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
Motif
Other DBs
NCBI-GeneID:
124116892
NCBI-ProteinID:
XP_048239770
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MNPKFQTEYKQNRPKGNISKGHKGKFKKQHYTRKPRLADVTDSEIAELKSRYKFIVPGNI
ETFADLPLCERTLKGLDHAKYTSPTEIQRESIGLALQGLDILGAAQTGSGKTLAFLLPVL
ECLYRQKWSSMDGMGALIISPTRELAYQTFEVLRKIGKLHDFSAGLVIGGKHLKEESERI
NQTNIVICTPGRLLQHMDETVNFTADALQILVLDEADRILDMGFAQTMNAIIENLPAERQ
TLLFSATQTKSVKDLARLSLANPMYVSVHEHSQHSTPAKLTQSYIVCELHEKLGMLWSFV
KNHLKSKVLVFLSCCKEVKYIYEAFKRMRPGVTVLCLHGAMNQLRRVEVYNSFCRKHNAL
LLATDVAARGLDFPAVNWVVQLDCPEDANTYIHRAGRTARYEKDGEALLVLLPSEEDAMV
QQLQDKKIPVNRIKVNTKKLSSVQPKLESLCAAEPALKEIAQRAFVAYLRGVFLMSNKAV
FDVSKLDIDKFARSLGLAVVPRVRFLQRDQKRRQERLQDKHQEKQKTSTKVLMRATHAAT
GTSGREGRPEGSSSASSGDEDEGNLQQIIQRKFNESSTSMQGNQHVLKSLISNRTSDTSE
SEDGETDKDESEDSDVESHSDDDSEEESEDSDVESHSDKEAERTNMNAKVKSRKTDRSVP
FRFDVDDDDDLFRVKRTIHVEDEDSEDEMVTRKKESLAKKKPTTKAKAVKKLLKKNIQLN
TKVKFDEAGEEVSDIYKKPQVKKIFEDDDDLGGINIAAARQRLQEEDKFDKQLHREKVKQ
KHREERFKKKDERRKKQQAAEEHSDNDAMLNTEAGASAIDLIPDPEKIYGTGGSFDDDDD
DTRDSYDDDDDDDRPSQAKRMRPSSPDVEESDKEDESDDVHSSDDDPGDRKLGVDERLEV
EEEMALRLLRGCV
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctaaatttcagacagaatataaacaaaatcgccccaagggcaatatatcgaaa
ggtcacaaggggaaattcaagaagcagcattacacacgaaagccaagactagcggatgtt
accgacagtgagatcgccgagttgaaatctcggtataagtttattgttcctggaaatatt
gagacctttgctgatctgccattgtgtgaaaggacactgaaaggtttggatcacgccaag
tatacatcccccacagaaatccagcgggaatccatcggcctcgccctccaaggactggac
atcttaggggcagcccagacaggatcagggaaaaccttggcatttctcctacctgtgttg
gagtgcctgtacagacagaaatggagttccatggatgggatgggagccttgattatctcc
cctacacgggagctggcataccagactttcgaggtgctccggaagattggcaagttacat
gacttctcagctggtcttgttattggtggcaagcatctgaaggaggagtctgagcgtatc
aaccagacgaatatcgtgatctgtacgccagggcgactactgcagcacatggatgagact
gtcaactttacagcagatgctctgcagatactagtgttggatgaagccgatcgaattctg
gacatgggttttgctcagaccatgaatgccatcatagagaatctgcctgcagaaagacaa
acccttctcttctctgccacacagaccaagtcggtgaaagaccttgcacgcctgagtctg
gccaaccccatgtacgtgtctgtccatgaacactcccaacacagcactccagccaaactg
acacagagctacattgtctgtgagctgcatgagaaacttggtatgctgtggtcatttgtc
aagaatcacctcaagtccaaggttctggtcttcctgtcctgctgcaaggaggtgaaatat
atttatgaggcgttcaagcgtatgcggccaggcgtgactgtgttgtgtctccatggggcc
atgaaccagctgaggagggtggaggtgtataactccttctgccggaaacacaatgctctg
ctgctggctaccgatgttgctgccaggggactggatttccccgctgtgaactgggttgtg
cagctggactgccctgaggatgcaaacacctacatccaccgagccggacgcacagccagg
tacgagaaggatggcgaggcattgctggtgttgctgccgtcggaggaggatgctatggtg
cagcagctgcaggacaagaagatacctgtcaacagaatcaaggtgaacaccaagaagctg
agcagtgtgcagcccaagctggagtcgctgtgtgccgctgaacctgcactgaaggagatt
gctcagagggcgttcgttgcctacctgcgtggggtcttccttatgagcaacaaggctgtg
tttgatgtcagcaagttggacattgacaaatttgccagatcgctgggcttggctgttgtg
ccgcgagtgagattcttgcagcgagatcagaagcggcgccaggaacgacttcaagacaag
catcaggaaaagcagaagacaagtaccaaggtgttgatgagggccacacatgccgccact
gggacatcagggagggagggtcgtcctgagggctcctccagcgcttcatcgggggatgag
gatgagggcaatctgcagcagataattcaaagaaagtttaatgagtcgtctactagcatg
cagggaaatcaacacgttttgaaatctttgataagtaataggacttctgatacatcagaa
agtgaggatggtgaaacagacaaagatgaaagtgaagacagtgatgttgagtctcattct
gatgatgattcagaggaagaaagtgaagacagtgatgtagagtctcattcagataaagag
gcagaaaggactaacatgaatgctaaagtcaagtctcggaagactgatcgtagtgtacct
tttagatttgatgtggatgacgacgatgatctgtttagagttaaacgcacaatacatgtg
gaggatgaagacagtgaggatgagatggtgacgaggaagaaagaaagccttgccaagaag
aaacccacaacgaaagcaaaagctgtaaagaaactgcttaagaaaaacatccaacttaat
accaaggtcaagtttgatgaagcaggggaggaagtttctgacatctacaagaagccacaa
gtgaaaaagatatttgaagatgatgatgacttggggggaatcaacattgctgctgctaga
cagagattacaggaagaagacaagtttgataaacagttacaccgagaaaaagtcaaacag
aaacacagggaggaaagattcaagaagaaagatgagagacggaagaagcagcaggctgct
gaggagcacagtgataatgatgcaatgttgaacactgaagcaggtgcatctgccattgac
ttgattcctgacccagaaaagatttatggaactggaggctcttttgatgatgatgatgat
gatactagagactcttatgatgatgatgatgatgatgatagaccaagccaggcaaagaga
atgagaccatcatcacctgatgtggaggaaagtgacaaggaagatgagagtgatgatgtg
cattcatcagatgatgacccaggagacaggaaacttggtgtggatgagagacttgaagtg
gaggaggaaatggcacttcgcttgttgcgtggctgtgtgtaa
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